Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028776.1 Length=59670 Score E Sequences producing significant alignments: (Bits) Value seq2646 132 2e-26 >seq2646 Length=27379 Score = 132 bits (146), Expect = 2e-26 Identities = 578/899 (64%), Gaps = 33/899 (4%) Strand=Plus/Minus Query 698 GTTGGCGTAGGGTACGGTAAATTTTGGAAGGGTATTATATTCGACCGTGAATATAAAAAC 757 ||||| | || ||||| | || ||| || | || || || | ||| |||||||| Sbjct 18187 GTTGGTCTTGGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGAGTATAAAAAT 18128 Query 758 CTTGATGACCTTGTAACTAAATCCCAGCGTTGGTTTCCTGAATTTAAAGACGGGGCTAAA 817 ||||||||| | || ||||||| | || ||||| | | | ||||| ||||| || ||| Sbjct 18127 CTTGATGACTTAATATCTAAATCAAAACGATGGTTCCGTCAGTTTAATGACGGCGCGAAA 18068 Query 818 TTCCTTAGCTCTAAGTCTGATTATAAATGGGTTTGGCCTACAGGTGAAGAGCTACTGTTC 877 ||| | || || || ||| ||||||||||||||||| ||||||||||| ||| Sbjct 18067 TTCATAAGTTCCGCATCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGAGCTTTGGTTT 18008 Query 878 CGCGTTGCTTGTAAA--GAAAAGGATTACTGGTCTTATCACGGTCACGAATACCCATTTA 935 || || || ||| || | |||| ||| || ||||| || |||| ||| | || Sbjct 18007 CGTGT--AATGAAAAACGAGGAAAATTATTGGAACTACCACGGACAAGAATTCCCCTATA 17950 Query 936 TCGGATGGAACGAATTAACAAAATATCCGGACGGGCGTTTGTTTGAAGCTAT---GATGT 992 | |||||||||||| |||| ||| | || | | | | | | || ||||| Sbjct 17949 TTGGATGGAACGAACTAACTAAACAACC---CAATCCTGAACTATACGACATGGCGATGT 17893 Query 993 CCTGTAACCGTTCATCTTTCTTAC---CAGAAGATAACCCAATTATT---AATCCAGATG 1046 | || ||| | || || ||| || | | | ||| |||| | || ||| || Sbjct 17892 CGCTAAATCGTACGTCATTTATACCGGCATTACACAGCCCTATTAATTCAAAAACAGGTG 17833 Query 1047 GTACGGTCACATATTTACCGGATATCCCTCTTGAAGTGTTTGCTACCAGTAACCCGTTTG 1106 | | | || || | | ||| |||||||||| ||||| || | ||| || | || Sbjct 17832 --AAGTTGACTTAATGA-GGGAAATCCCTCTTGTGGTGTTAAGCACTACTAATCCATATG 17776 Query 1107 GTGCGGGGCATAACTGGGTTAAGAAACGCTTCATTGACGCTGCACCGATGGGTAAAATAC 1166 ||| ||||| || ||||| || |||| ||||| || | |||||| ||| || | Sbjct 17775 GTGTTGGGCACAATTGGGTGAAACAACGTTTCATCGATGTTGCACCCCCGGGAAAGGTTG 17716 Query 1167 TCAGGAAGACTACGAGAGTGTTTAACCCGAGGACGCAGAAAGACGAAGATGTGGTTACGA 1226 | | | |||| | || ||||| || || || || ||| ||| | | | Sbjct 17715 TTACTATAACTAGGGATGTCTTTAATCCTAGAACTCAAAAACGTGAACCAATAACAAAAA 17656 Query 1227 CGCAATGCCATATCTTTGGTTCGTACCGTGAAAACAAAAACCTAAGTCCAAAATATATTG 1286 | || | | | || || ||| ||||| | |||| ||||| ||||||| | Sbjct 17655 CACAGGTTCGTTTGTTCGGAAGTTACAAAGAAAATATTTACCTCAGTCCTGAATATATCG 17596 Query 1287 CAGAACTTATGTCTATCACAGACCCGAACAAGCGT-GC--TGCATGGTTGGGCGGGAGCT 1343 | |||||| || | ||| || || ||| || ||| ||| | || | | Sbjct 17595 CTGAACTTGAAGGGATTAAAGA---TAAGAATCGTCGCCTTGCTTGGCTCCATGGAAATT 17539 Query 1344 GGGATATTACATCCGGTGGTATGTTCGATGACCTGTGGCGTAGCACTGTTCACAA---AG 1400 |||||||||| ||| || ||| ||||||| ||||| ||| | | |||| | Sbjct 17538 GGGATATTACGAGCGGAGGAATGCTCGATGATGTGTGG-TCAGCTCAAT--ACAATGTCG 17482 Query 1401 TACGACCATTCCCGATTCCAGCGAGTTGGAAGATTACACGTTCTTTCGACTGGGGTTCTT 1460 || | ||| | || || | |||||||| || ||||| || || ||||| || | Sbjct 17481 TAGAAAATTTCACAATCCCTCCAAGTTGGAAAATGTTTCGTTCCTTTGATTGGGGCTCCT 17422 Query 1461 CAAAACCGTTTTCTATCGGTTGGTGGGCTATTAGTGATGGTTCGGATGTTGTGCGTGAAG 1520 ||||||| || || | ||||||||||| || |||||||| ||||| | | | Sbjct 17421 CAAAACCCTTCTCAGTTGGTTGGTGGGCGGAAAGCGATGGTTCCGATGTACTTCTTTCGA 17362 Query 1521 ATGG-CACTACATTCTCCACGGTCCGCGGTGACCTGTTTAGGATTAACGAATGGTATGG 1578 |||| || | ||| || ||| | ||||| ||||||| ||| || |||||||| Sbjct 17361 ATGGTCAAT-GGCGCTCAACTGTCAGAGGTGATTTGTTTAGAATTGGTGAGTGGTATGG 17304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190687374904608