Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq20357 161 3e-35 >seq20357 Length=552 Score = 161 bits (178), Expect = 3e-35 Identities = 235/325 (72%), Gaps = 14/325 (4%) Strand=Plus/Minus Query 39023 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGC 39082 ||||||||| | |||||||| | ||||| ||| || |||||||| | || |||| |||| Sbjct 476 GCCGCCATGAATTCGGCCGGATGGTGCGCCTTGAGCCACGCCGTGTGATAAGCGAGGAGC 417 Query 39083 CCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCC 39142 |||| || || | ||||| |||||||||| |||| || ||||| | | || ||| Sbjct 416 GCGTAAGCGGCCGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAAGTCG 357 Query 39143 CACA------CCGCCTGGATGGCGCTGTCCGAGTAGCC-TCGCTCGCGCGCTCCCTTCTG 39195 | |||||| | |||| || ||| ||| | |||| ||| || | | Sbjct 356 AAGGTTTCGTCCGCCTTT-TCGCGC-GT--GAG--GCCGTTTTTCGC-CGCGCCTTCCGC 304 Query 39196 GAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAG 39255 |||| || || | |||||||| |||||||||||||||||||||| || |||||||| Sbjct 303 GAAGATCTCGCGGTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATCGCGCGACGCAG 244 Query 39256 CAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTC 39315 || |||||| ||| || |||||| ||| |||||||||| || | ||||||||| Sbjct 243 CAAGTCGGCGCCGCCGAGCGAGTAGCCGCCGATGATCTGCGCCATCTGCATCACCTGCTC 184 Query 39316 CTGGTAGATGATGAGCCCGTACGTC 39340 |||||||| |||| ||||| ||| Sbjct 183 CTGGTAGACCATGATGCCGTAGGTC 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160292897133138