Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028831.1 Length=61235 Score E Sequences producing significant alignments: (Bits) Value seq2646 163 1e-35 >seq2646 Length=27379 Score = 163 bits (180), Expect = 1e-35 Identities = 545/835 (65%), Gaps = 41/835 (5%) Strand=Plus/Minus Query 22600 TGTTGGTGTAGGGTACGGTAAATTTTGGAAGGGTATTATATTCGACCGTGAATATAAAAA 22659 ||||||| | || ||||| | || ||| || | || || || | ||| |||||||| Sbjct 18188 TGTTGGTCTTGGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGAGTATAAAAA 18129 Query 22660 CCTTGATGACCTTGTAACTAAATCCCAGCGTTGGTTTCCTGAATTTAAAGACGGGGCTAA 22719 ||||||||| | || ||||||| | || ||||| | | | ||||| ||||| || || Sbjct 18128 TCTTGATGACTTAATATCTAAATCAAAACGATGGTTCCGTCAGTTTAATGACGGCGCGAA 18069 Query 22720 ATTCCTTAGCTCTAAGTCTGATTATAAATGGGTTTGGCCTACAGGTGAAGAGCTACTTTT 22779 |||| | || || || ||| ||||||||||||||||| ||||||||||| || Sbjct 18068 ATTCATAAGTTCCGCATCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGAGCT--TT-- 18013 Query 22780 CCGCGTTGCTTGTAAAGAAA----AGG---ATTACTGGTCTTATCACGGTCACGAATACC 22832 ||| | ||||| |||| ||| |||| ||| || ||||| || |||| || Sbjct 18012 ---GGTTTCGTGTAATGAAAAACGAGGAAAATTATTGGAACTACCACGGACAAGAATTCC 17956 Query 22833 CATTTATCGGATGGAACGAATTAACAAAATATCCGGACGGGCGTTTGTTTGAAGCTAT-- 22890 | | ||| |||||||||||| |||| ||| | || | | | | | | || Sbjct 17955 CCTATATTGGATGGAACGAACTAACTAAACAACC---CAATCCTGAACTATACGACATGG 17899 Query 22891 -GATGTCCTGTAACCGTTCATCTTTCTTAC---CAGAAGATAACCCAATTATT---AATC 22943 |||||| || ||| | || || ||| || | | | ||| |||| | || Sbjct 17898 CGATGTCGCTAAATCGTACGTCATTTATACCGGCATTACACAGCCCTATTAATTCAAAAA 17839 Query 22944 CAGATGGTACGGTCACATATTTACCGGATATCCCTCTTGAAGTGTTTGCTACCAGTAACC 23003 ||| || | | | || || | | ||| |||||||||| ||||| || | ||| | Sbjct 17838 CAGGTG--AAGTTGACTTAATGA-GGGAAATCCCTCTTGTGGTGTTAAGCACTACTAATC 17782 Query 23004 CGTTTGGTGCGGGGCATAACTGGGTTAAGAAACGCTTCATTGACGCTGCACCGATGGGTA 23063 | | ||||| ||||| || ||||| || |||| ||||| || | |||||| ||| | Sbjct 17781 CATATGGTGTTGGGCACAATTGGGTGAAACAACGTTTCATCGATGTTGCACCCCCGGGAA 17722 Query 23064 AAATACTCAGGAAGACTACGCGAGTGTTTAACCCGAGGACGCAGAAAGACGAAGATGTGG 23123 | | | | | |||| | || ||||| || || || || ||| ||| | Sbjct 17721 AGGTTGTTACTATAACTAGGGATGTCTTTAATCCTAGAACTCAAAAACGTGAACCAATAA 17662 Query 23124 TTACGACGCAATGCCATATCTTTGGTTCGTACCGTGAAAACAAAAACCTAAGTCCAAAAT 23183 | || || | | | || || ||| ||||| | |||| ||||| ||| Sbjct 17661 CAAAAACACAGGTTCGTTTGTTCGGAAGTTACAAAGAAAATATTTACCTCAGTCCTGAAT 17602 Query 23184 ATATTGCAGAACTTATGTCTATCACAGACCCGAACAAGCGT-GC--TGCATGGTTGGGCG 23240 |||| || |||||| || | ||| || || ||| || ||| ||| | | Sbjct 17601 ATATCGCTGAACTTGAAGGGATTAAAGA---TAAGAATCGTCGCCTTGCTTGGCTCCATG 17545 Query 23241 GGAGCTGGGATATTACATCCGGTGGTATGTTCGATGATCTGTGGCGTAGCACTGTTCACA 23300 | | ||||||||||| ||| || ||| |||||||| ||||| ||| | | ||| Sbjct 17544 GAAATTGGGATATTACGAGCGGAGGAATGCTCGATGATGTGTGG-TCAGCTCAAT--ACA 17488 Query 23301 A---AGTACGACCATTCCCAATTCCAGCAAGTTGGAAGATTACACGTTCGTTTGACTGGG 23357 | ||| | ||| |||| || |||||||||| || ||||| ||||| |||| Sbjct 17487 ATGTCGTAGAAAATTTCACAATCCCTCCAAGTTGGAAAATGTTTCGTTCCTTTGATTGGG 17428 Query 23358 GTTCTTCAAAACCTTTCTCTGTCGGTTGGTGGGCCATTAGTGATGGTTCGGATGT 23412 | || |||||||| ||||| || ||||||||||| || |||||||| ||||| Sbjct 17427 GCTCCTCAAAACCCTTCTCAGTTGGTTGGTGGGCGGAAAGCGATGGTTCCGATGT 17373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195691831265718