Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq13641 102 2e-17 seq2646 93.3 1e-14 >seq13641 Length=1072 Score = 102 bits (112), Expect = 2e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCG 31313 |||||| ||||| |||||||||||||||| ||||| | ||||||| | |||||||||||| Sbjct 311 TGGCTGGGCCGGCAGGATTCGAACCTACGCATGCCAGGATCAAAACCTGGTGCCTTACCG 370 Query 31314 CTTGGCGACGGCGCAA 31329 |||||||||||| ||| Sbjct 371 CTTGGCGACGGCCCAA 386 >seq2646 Length=27379 Score = 93.3 bits (102), Expect = 1e-14 Identities = 210/311 (68%), Gaps = 21/311 (7%) Strand=Plus/Minus Query 2398 GGTTACGGTAAGTTCTGGCGCGGCGTTATCTTCGATCTTGAATTCGACCATTTGGCCGGA 2457 |||||||| | ||||||||||| || || || |||||||| | | || | | | | Sbjct 18178 GGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGAGTATAAAAATCTTGATG-A 18120 Query 2458 CTTG-TCGCCGAATCTAAAAAATGGTTCGGCGATAATGGCAAGTTGAAAGACGGGGCGAA 2516 ||| | | |||| ||| ||||||| | | ||| || ||||| ||||| Sbjct 18119 CTTAATATCTAAATCAAAACGATGGTTCCGTCA---------GTTTAATGACGGCGCGAA 18069 Query 2517 GTTCTTAGAATCGCCGTCCCAATACAAATGGGTTTGGCCGACTGGCGAAGAACTGTTGTT 2576 ||| || || | ||||| | |||||||||||||| || || ||||| || | ||| Sbjct 18068 ATTCATAAGTTCCGCATCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGAGCTTTGGTT 18009 Query 2577 TCGCCATGTAAAGAAGGTCGCCG---ATTA--CGAAGGCTTCCACGGTCACGAATACCCG 2631 ||| ||||| ||| || | |||| ||| || |||||| || |||| ||| Sbjct 18008 TCG---TGTAATGAAAAACGAGGAAAATTATTGGAA--CTACCACGGACAAGAATTCCCC 17954 Query 2632 TATATCGGATGGAACGAATTAACGAAGCATCCTAGCGGCGACCTGTACGACAAGTTTATG 2691 ||||| |||||||||||| |||| || || || | || || ||||||| | ||| Sbjct 17953 TATATTGGATGGAACGAACTAACTAAACAACCCAATCCTGAACTATACGACATGGCGATG 17894 Query 2692 TCGGTCAACCG 2702 ||| | || || Sbjct 17893 TCGCTAAATCG 17883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138100611416778