Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq27956 187 6e-43 >seq27956 Length=409 Score = 187 bits (206), Expect = 6e-43 Identities = 272/378 (72%), Gaps = 6/378 (2%) Strand=Plus/Minus Query 24467 TAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCATCGGTGTTCTGCC 24526 ||| ||||||| | |||| | | || || ||||| | ||| ||| || ||| | || Sbjct 376 TAATTTCTTTTTCTCCCACACCTCCTTACCTTCAAGGAGGGTCTGCATTGGGGTTTTTCC 317 Query 24527 ACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAATACATTAA-CCACTCATCTA 24585 | || ||||| |||||||| |||| | | |||||| | ||| || ||| ||||| | Sbjct 316 ATTACAGATTTTACCTTGATGAGTTCTCTCATAATTATATT-CATAAATCCAGTCATCCA 258 Query 24586 AATCCGCTTGTAATGTCGTTAAATCCGTA--TAAATTTTCTTCCTAAATGCCACTTGGTA 24643 || |||||| || || ||| | |||| ||| |||||||||| |||||||| Sbjct 257 CGTCTTTTTGTAAA-TC-TTCAATGGTTGAGTAAACTTTTTTCCTAAATGTTACTTGGTA 200 Query 24644 AAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGCGGATGTTT 24703 ||| || | ||| |||||| |||| || ||||| || || || || ||||||||||| || Sbjct 199 AAACTCGTTTAAAATTGTTCTATGAAAACGTTCACATATTCCATTTGTCTGCGGATGCTT 140 Query 24704 TACCTTGGTTTTACTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATT 24763 ||||| ||||| |||| ||||| | || | || || || | | ||||||||| | Sbjct 139 GACCTTTGTTTTTGTGTGATCAATGTTTTTAACCGCCAAGTACAATTGATAATCGTGCTC 80 Query 24764 TTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACC 24823 ||| ||| ||||| || || | |||| ||||||||||| |||||||| |||| | Sbjct 79 GTCTGGCTTACCACAGTACTCTGTGCCTCTATCAGTTAATATTCGTAACATTGGTAGATT 20 Query 24824 TTGGCTTTCAAAGTATGG 24841 ||||||||||| |||| Sbjct 19 GTGGCTTTCAAAAAATGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114242305403844