Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq20357 147 7e-31 >seq20357 Length=552 Score = 147 bits (162), Expect = 7e-31 Identities = 228/321 (71%), Gaps = 6/321 (2%) Strand=Plus/Minus Query 38363 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGT 38422 ||||||||| | |||||||| | ||||| ||| || |||||||| | || |||| ||| Sbjct 476 GCCGCCATGAATTCGGCCGGATGGTGCGCCTTGAGCCACGCCGTGTGATAAGCGAGGAGC 417 Query 38423 CCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCC 38482 |||| || || | ||||| |||||||||| |||| || ||||| | | || ||| Sbjct 416 GCGTAAGCGGCCGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAAGTCG 357 Query 38483 CACAC--CGCCCGGATGGCAGCGTCCGAGTAGCC-TCGCTCGCTTGCTCCCTTCTGGAAG 38539 | || ||| | ||| ||| ||| | |||| || || | | |||| Sbjct 356 AAGGTTTCGTCCGCCTTTTCGCGCGTGAG--GCCGTTTTTCGCC-GCGCCTTCCGCGAAG 300 Query 38540 TTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGG 38599 || || | |||||||| |||||||||||||||||||||| |||||||| || | | Sbjct 299 ATCTCGCGGTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATCGCGCGACGCAGCAAG 240 Query 38600 TCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGG 38659 ||||| ||||| | ||| ||| | | |||||||||| || | ||||||||||||| Sbjct 239 TCGGCGCCGCCGAGCGAGTAGCCGCCGATGATCTGCGCCATCTGCATCACCTGCTCCTGG 180 Query 38660 TAGATGATGAGCCCGAAGGTC 38680 |||| |||| ||| ||||| Sbjct 179 TAGACCATGATGCCGTAGGTC 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160126614877050