Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_029021.1 Length=60747 Score E Sequences producing significant alignments: (Bits) Value seq2646 158 5e-34 seq5218 84.2 8e-12 >seq2646 Length=27379 Score = 158 bits (174), Expect = 5e-34 Identities = 245/350 (70%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 614 ATTTTATATCATGGTACTCGTGGCCCTGGAAAGACCGATGCTCAGTTGATGCGTTTTCGT 673 ||| | ||| | || ||| | || || || |||||||| ||||| | ||| |||||| Sbjct 18253 ATTCTTTATGAAGGGACTAGGGGGCCGGGGAAGACCGACGCTCAAGTAATGTACTTTCGT 18194 Query 674 CGTTATGTTGGCATGGGGTACGGTAAACACTGGCGCGGTATCATTTTTGACCGAGAATAC 733 || | |||||| | || ||||| | ||||||||| | |||||||| | || || Sbjct 18193 CGCTTTGTTGGTCTTGGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGAGTAT 18134 Query 734 AAAAACTTAGATGACTTAGTTGCAAAGTCACAGCGTTGGTTTCCTGAATTTAATGATGGT 793 ||||| | ||||||||| | | || ||| | || ||||| | | | |||||||| || Sbjct 18133 AAAAATCTTGATGACTTAATATCTAAATCAAAACGATGGTTCCGTCAGTTTAATGACGGC 18074 Query 794 TGTAAATTCTTATCTTCCAAGTCAGATTATAAATGGGTATGGCCTAGCGGCGAAGAACTA 853 |||||| || |||| || ||| |||||||| ||||||| || ||||| || Sbjct 18073 GCGAAATTCATAAGTTCCGCATCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGAGCTT 18014 Query 854 ATGTTCCGTGTTGCTAAAAAGCCTAAGGATTACTGGCTGTACCACGGTCAGGAATTTCCA 913 ||| ||||| ||||| | |||| ||| |||||||| || ||||| || Sbjct 18013 TGGTTTCGTGTAATGAAAAACGAGGAAAATTATTGGAACTACCACGGACAAGAATTCCCC 17954 Query 914 TTTATTGGATGGAACGAATTAACTAAATATCCTGATAGTGGACTTTATGA 963 | |||||||||||||||| |||||||| | || || || ||| || || Sbjct 17953 TATATTGGATGGAACGAACTAACTAAACAACCCAATCCTGAACTATACGA 17904 Score = 82.4 bits (90), Expect = 3e-11 Identities = 177/257 (69%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 1361 GCATGGCTCGGTGGTAGCTGGGATATTACGTCAGGTGGAATGTTCGACGACCTGTGG-CG 1419 || |||||| ||| | |||||||||||| || |||||| |||| || ||||| | Sbjct 17557 GCTTGGCTCCATGGAAATTGGGATATTACGAGCGGAGGAATGCTCGATGATGTGTGGTCA 17498 Query 1420 CCAGAATATACATGTGGTCAAACCATTTC-CAATACCTCACTCCTGGAGAATTGATAGAT 1478 | |||| | |||| || || ||||| |||| |||| |||| ||| | | | Sbjct 17497 GCTCAATACA-ATGTCGTAGAAA-ATTTCACAATCCCTCCAAGTTGGAAAATGTTTCGTT 17440 Query 1479 CATTTGACTGGGGCTCAAGTAAACCGTTTTCTGTTGGTTGGTGGGCAAGAAGTGATGGTA 1538 | ||||| |||||||| ||||| || || |||||||||||||| ||| |||||| Sbjct 17439 CCTTTGATTGGGGCTCCTCAAAACCCTTCTCAGTTGGTTGGTGGGCGGAAAGCGATGGTT 17380 Query 1539 GCGATATCGTGTATCCAAATGGGC-GTCGTGTACGAACAGTACGAGGTGACTTATTTAGG 1597 |||| | | | | ||||| | | | | | ||| || ||||||| || ||||| Sbjct 17379 CCGATGTACTTCTTTCGAATGGTCAATGGCGCTC-AACTGTCAGAGGTGATTTGTTTAGA 17321 Query 1598 ATCATGGAGTGGTATGG 1614 || ||||||||||| Sbjct 17320 ATTGGTGAGTGGTATGG 17304 >seq5218 Length=8244 Score = 84.2 bits (92), Expect = 8e-12 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 34051 ATTGGATGTATAGTTTGTATCACATCCTGGGCATTGCAGATTACAACCAGCTAATCGAAC 34110 ||||| || || | |||||||||||||| ||||| | || ||||| |||| |||| Sbjct 7904 ATTGGTGGTGTATTCGGTATCACATCCTGGACATTGTAAGTTGCAACCGCCTAAACGAAT 7963 Query 34111 AAATACGGCAGGTTGACCACAAAATGGGCCTTCGCCTTGAATGGTATGAAAAAT 34164 || | ||||||||||||||| | ||||||||||| || || || |||||| Sbjct 7964 GAAAATAGCAGGTTGACCACAATAAGGGCCTTCGCCCTGTATTGTGGAAAAAAT 8017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194131336247046