Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_029097.1 Length=44496 Score E Sequences producing significant alignments: (Bits) Value seq2646 138 3e-28 >seq2646 Length=27379 Score = 138 bits (152), Expect = 3e-28 Identities = 254/367 (69%), Gaps = 4/367 (1%) Strand=Plus/Minus Query 2077 CATACGCTTTATACGGGAACGCGGGGGCCGGGGAAAACCGACGCGCAACTTATGAAATTC 2136 |||| |||||| || || ||||||||||||| |||||||| ||| | ||| | || Sbjct 18256 CATATTCTTTATGAAGGGACTAGGGGGCCGGGGAAGACCGACGCTCAAGTAATGTACTTT 18197 Query 2137 CG-CGATGGGGTCGGCCAAGGTTACGGCCCCTTTTGGCGCGGTATTATCCTTGACCGCGA 2195 || || | || || | |||||||| | ||| |||||||| | || |||| | || Sbjct 18196 CGTCGCT-TTGTTGGTCTTGGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGA 18138 Query 2196 ATATAAAAACCTTGACGACCTTATTTCGAAGTCGCGTCGTTGGTTTCCCGAATTTAACGA 2255 |||||||| ||||| ||| | || || || || || ||||| | | ||||| || Sbjct 18137 GTATAAAAATCTTGATGACTTAATATCTAAATCAAAACGATGGTTCCGTCAGTTTAATGA 18078 Query 2256 CGGGGCTAAGTTCCTGTCTTCAACGTCGGCGCTTAAATGGGTTTGGCCGACAGGCGAAGA 2315 ||| || || ||| | ||| | || | |||||||||||||| || || ||||| Sbjct 18077 CGGCGCGAAATTCATAAGTTCCGCATCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGA 18018 Query 2316 ACTGTTGTTTCGTTCCGCTGATAAA-GAACAAGATTATTGGCAATTTCACGGGCACGAGT 2374 || | |||||| | ||| ||| || || |||||||| | | ||||| || || | Sbjct 18017 GCTTTGGTTTCG-TGTAATGAAAAACGAGGAAAATTATTGGAACTACCACGGACAAGAAT 17959 Query 2375 ACCCGTTTCTAGGCTGGAACGAATTAACGAAATACCCGACCGCCGACCTTTACGACATGT 2434 ||| | | | || ||||||||| |||| ||| | || | | || || ||||||||| Sbjct 17958 TCCCCTATATTGGATGGAACGAACTAACTAAACAACCCAATCCTGAACTATACGACATGG 17899 Query 2435 TTATGTC 2441 ||||| Sbjct 17898 CGATGTC 17892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142164933483852