Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1300 172 1e-37 seq7865 127 5e-24 seq24 98.7 2e-15 >seq1300 Length=83366 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || ||||||||||| ||||| || |||||||| || || | || Sbjct 7888 TCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAG 7829 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||||||||||||||| || |||||||| ||||| ||||| || || || | Sbjct 7828 AGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGAT 7769 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| |||||||||||||| || ||||||||||| ||| ||||||| || || || Sbjct 7768 TCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACTTC 7709 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | ||||| ||||| || || || ||||||||||| | |||||| || Sbjct 7708 CAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCATATT 7661 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||||||||| ||||| || |||||||| || || | || || | |||||| Sbjct 8103 AGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCT 8044 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || || |||||||| ||||| ||||| || || || | ||| ||||||||| Sbjct 8043 TCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCC 7984 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || ||||||||||| ||| |||||| || || || | ||||| ||| Sbjct 7983 TGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGTC 7924 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 7923 TTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 >seq7865 Length=4356 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || ||||| || |||||||| || || || || | |||||| Sbjct 3609 AGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3668 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || || || || || | || || ||||| Sbjct 3669 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCCTCTTTGTCT 3728 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| ||||| |||||||| | || |||| || ||||| || ||||| Sbjct 3729 TGGATCTTGGCCTTCACATTTTCGATTGAATC---GCTTGCCTCTACCTCAAGGGTGATG 3785 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || ||||| | |||||| Sbjct 3786 GTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Score = 118 bits (130), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| || || || || | |||||| Sbjct 3381 AGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3440 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || || || || || | || || ||||| Sbjct 3441 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCCTCTTTGTCT 3500 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 |||||||| ||||| ||||| || | ||| ||| || ||||| || ||||| Sbjct 3501 TGGATCTTGGCCTTCACATTTTCAATCGAATCA---CTTGCCTCGACCTCAAGGGTGATG 3557 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || ||||| | |||||| Sbjct 3558 GTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 84.2 bits (92), Expect = 5e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| || || || || | |||||| Sbjct 3837 AGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3896 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || || || || || | || || |||||| Sbjct 3897 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCCTCTTTGTCC 3956 Query 211023 TGGA 211026 |||| Sbjct 3957 TGGA 3960 >seq24 Length=941673 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || || || | ||||||||||||||| |||||||| || ||||||| ||| || | | Sbjct 528632 AGCCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTGCGT 528691 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 ||||| |||||||| || || || || || || || || || || ||||||| |||| Sbjct 528692 CCATCCTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGGAATTCCT 528748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158267035625255