Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7865 95.1 8e-15 seq1300 86.0 4e-12 >seq7865 Length=4356 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| || ||||| ||||| || || || || | | Sbjct 3592 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTCGAGGCAAGT 3533 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| | || || || |||||||| || | || || ||||| Sbjct 3532 GATTCGATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCAG 3473 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || ||||| ||||| || |||||||| | |||||| | | || |||||| Sbjct 3472 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3413 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 3412 ATCCAGAAGGAGTCTAC 3396 >seq1300 Length=83366 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || ||||| || || || || ||||| | ||||| || | Sbjct 7661 AATATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCA 7720 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||| |||||| | || ||||| ||||| || || | || || ||| Sbjct 7721 TCTGACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGAT 7780 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 |||||||| | || || ||||| || || |||||||| | |||||| | ||| ||| Sbjct 7781 CAACAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTAC 7840 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || ||||| || Sbjct 7841 AACATCCAGAAGGAGTCTAC 7860 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||| || || || || ||||| | ||||| || | | Sbjct 7892 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATCT 7951 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||| |||||| | || ||||| ||||| || || | || || |||||| Sbjct 7952 GACTGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 8011 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||| ||||| |||||||| | |||||| | ||| |||||| Sbjct 8012 CAGCGCCTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 8071 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 8072 ATCCAGAAGGAGTCTAC 8088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337764131830196