Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq16431 114 3e-20 seq7865 102 2e-16 seq59587 91.5 4e-13 seq1598 84.2 5e-11 >seq16431 Length=728 Score = 114 bits (126), Expect = 3e-20 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| ||||| ||| ||||||||||||| ||||||||||| | | | Sbjct 305 TGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 364 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTACGCG 7855 |||||| || |||||||||||||||||||| |||| | | |||| || | ||||||| Sbjct 365 CCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCAACTTACGCG 424 Query 7856 TTAGCT 7861 |||||| Sbjct 425 TTAGCT 430 >seq7865 Length=4356 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||||||||| || || || || || |||| ||||| || || ||| Sbjct 3599 ACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGT 3658 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| ||||| | | || || || || || || || Sbjct 3659 GCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCC 3718 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGAT 225647 || |||||||||||||| ||||||| |||||| Sbjct 3719 CTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGAT 3754 Score = 93.3 bits (102), Expect = 1e-13 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| ||||| || || || || || |||| ||||| || || ||| Sbjct 3371 ACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGT 3430 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| ||||| | | || || || || || || || Sbjct 3431 GCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCC 3490 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGAT 225647 || |||||||||||||| ||||||| ||| || Sbjct 3491 CTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAAT 3526 >seq59587 Length=14919 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| |||||| |||||||||||||| || | |||||| || || ||||| || ||||| | Sbjct 10962 ATACTTCAGGGTGACCAAAAAATCAAAAAAGATGTTGGTACAGAATAGGGTCTCCTCCTC 10903 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||||||||||| |||||| | ||||| ||| || || Sbjct 10902 CTGCAGGATCAAAAAAAGAAGTATTTAGATTTCGATCTGTCAA 10860 >seq1598 Length=78413 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| |||||| |||||||||| ||| || | |||||| || || ||||| || ||||| | Sbjct 76104 ATACTTCAGGGTGACCAAAAA-TCAAAAAAGATGTTGGTACAGAATAGGGTCTCCTCCTC 76162 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||||||||||| |||||| | ||||| ||| || || Sbjct 76163 CTGCAGGATCAAAAAAAGAAGTATTTAGATTTCGATCTGTCAA 76205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191620751993378