Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq459 197 1e-45 >seq459 Length=230215 Score = 197 bits (218), Expect = 1e-45 Identities = 447/677 (66%), Gaps = 15/677 (2%) Strand=Plus/Minus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||| ||| ||||| | | || || || | ||||| | ||||||||| || || Sbjct 32092 GGCTCTCTCGTCAGCTGCTCCTTGAGAGGATCTATGTGGTTTACGTAGACGTGCGCGTCG 32033 Query 29684 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29743 |||| ||||| || || || |||||| || || || ||||| || | ||||||||| Sbjct 32032 CCCATCGTGTGCACGAAATCCCCCGGTCTCAGGCCTGTCACGTGCGCTACCATGTACGTT 31973 Query 29744 AGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGG 29803 || || | ||||||||||||||| || ||||| || | || ||||| | || | ||| Sbjct 31972 AGAAGCGCGTAGCTGGCGATGTTGAAAGGCACGCCCAAACCTATGTCTGCAGATCGCTGA 31913 Query 29804 TAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCATGGCACGGA 29863 || |||||||| || ||||| |||| || |||||||| ||| | || ||||| || Sbjct 31912 TAAAGCTGGCAGGACAGCTCCCCGTTGCATACGTAAAATTGAACAAACGCGTGGCATGGC 31853 Query 29864 GGAAGGGCCAT------GAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGC 29917 || || ||||| |||| || || |||||||| || | || ||||| | | Sbjct 31852 GGCAGCGCCATCTTTGGGAGA-TCAGGT-----GGGTTCCACGCGCTCATAATGATTCTC 31799 Query 29918 CTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATC 29977 | ||| || || ||| || | || || | | | || ||||| || || ||| Sbjct 31798 CGGTCGTCGGGATTGGTCTTAATCGTGTGAATGACCTTGGCGAGCTGGTCAACGCCCTGG 31739 Query 29978 CCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCG 30037 || ||||| || | | || || | |||||| || || Sbjct 31738 CCGGAGTAATCCGCGTACATATCCTTGTACTCGGCACCAAAGTGACGCCACTGAAAGCCA 31679 Query 30038 TACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCT 30097 || ||||| || || || ||||| | | |||| | | || |||| | || || Sbjct 31678 TAGACCGGCCCGAGATCACCCTCGACGCGATGCTGCAGGTTCCGGGTGTCAAGGAACTCG 31619 Query 30098 CTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTG 30157 | || | ||||| |||||||| | || ||||||||||| |||||||| ||||||| Sbjct 31618 CGCGAGCAATTGGCATCCCAGATGTGGACGCCCTTCTCGGACAGCTCTTTTCCGTTTGTG 31559 Query 30158 GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTC 30217 || | || |||||| || || ||||| ||||| | | ||||| | ||| ||| Sbjct 31558 CTGCCGCGGATGAACCAGAGTAGTTCCTCGGCGACGCCGCGGAAGAAGACTCGCTTTGTC 31499 Query 30218 GTGAGGAG-GGGAAACTGTC--CCTTGAGGCCGTACCTCGCCTGAGACCCAAACATGGAC 30274 || || || || ||| |||| | | || ||| |||| ||| | ||||||||||| Sbjct 31498 GTCAGCAGTGGAAAAATGTCATTCCTCAGATTGTATCTCGACTGCGTTCCAAACATGGAT 31439 Query 30275 AAGACTCCCGTGCCTGT 30291 || ||||||||| || Sbjct 31438 AACGTTCCCGTGCCAGT 31422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405868237557082