Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq38469 98.7 3e-16 seq33794 93.3 1e-14 seq34120 89.7 2e-13 >seq38469 Length=310 Score = 98.7 bits (108), Expect = 3e-16 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 34048 TAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGAC 34107 |||||| | || || ||||| |||||||| || ||||||||||||||||| || || || Sbjct 86 TAGACCGCCTCCCGATACACAAACATGATGACATCGGCGTCCTGCTCGATGGCTCCCGAT 145 Query 34108 TCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGC 34167 || |||||||| |||||||| || || |||| | || || || || || || ||| Sbjct 146 TCTCGCAGGTCGGACATCATGGGACGTTTGTCGGTGCGACTTTCGAGAGAACGATTTAGC 205 Query 34168 TGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTGCACTG-GCGGGA 34226 || ||||| | | ||| || | | | ||| ||||||| ||| | || || ||||| Sbjct 206 TGTGACAGTGCAACCACCGGCAAGCTCAACTCTTTGGCCAG-AGCCTTCAATGAACGGGA 264 Query 34227 CATGTC 34232 || || Sbjct 265 GATCTC 270 >seq33794 Length=347 Score = 93.3 bits (102), Expect = 1e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34039 TCCGGGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATC 34098 || |||| ||| || ||||| ||||| | |||| ||| ||||| ||||| |||||||| Sbjct 46 TCGGGGTTATAAACTTCGTCGCGGTAGATAAACAGGATGACGTCAGCGTCTTGCTCGATA 105 Query 34099 GCCCCGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAG 34158 | || || || |||| ||||||||| | ||| || || | ||| || || || | Sbjct 106 CCGCCCGATTCACGCAAGTCCGACATGACCGGGCGTTTATCCGGTCGTTGTTCGACACTT 165 Query 34159 CGGTTGAGCTGCGACAGCACGATCACGGG 34187 || |||||||||||||| | ||||| || Sbjct 166 CGATTGAGCTGCGACAGTGCAATCACCGG 194 >seq34120 Length=344 Score = 89.7 bits (98), Expect = 2e-13 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 4501 ATCAGCGGCAGCCCCTACGTGATCGTCGACATCCGATTGCGGATGCTGAAACCGCGTGAG 4560 ||||||||| | |||||||||||||||||| | ||||||||||| | |||| ||| Sbjct 307 ATCAGCGGCGAGCAGTACGTGATCGTCGACATCGGGATGCGGATGCTGCAGCCGCACGAG 248 Query 4561 TTGTACCGCGCCCAGGGCTTCCCCGACAGCTACATCATCGAGCGGGGCCACAACGGGCAG 4620 | | | ||| ||||||||||| | |||||| ||||| | | || |||||| || Sbjct 247 CTCAAGCTCGCGCAGGGCTTCCCGGCCAGCTATGTCATCAATCCGGTAGTCAACGGCAAG 188 Query 4621 C--GGTTCACTCTATCCCAGCAGGTCCACATGTGCGGCAACAGCGTGAGCCC 4670 | |||| | | | ||||| | |||| ||||||||||||| |||| Sbjct 187 CCACTTTCAAAGTCTTC--ACAGGTGCGCATGATCGGCAACAGCGTGTGCCC 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160350456375630