Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq2646 86.0 2e-12 seq5218 80.6 1e-10 >seq2646 Length=27379 Score = 86.0 bits (94), Expect = 2e-12 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 7796 CGACTACTGGACCCGCCGCCAGCAGGCCGCGTTCGTTGCGACCCTGAACGGTGTGTTCGC 7855 || ||||||| | | || | || || || || |||| || ||| |||||||| || Sbjct 11654 CGGCTACTGGGCAAGACGACTCCAAGCTGCATTTATTGCAACAATGACGGGTGTGTTTGC 11595 Query 7856 GGACAACGCCGCAGCGCCCACCGGCACCGAGCACGTCCAGAACGACATGACCCATGACGT 7915 ||||||| || || || || ||| | |||||||| || |||||| |||| | Sbjct 11594 TGACAACGATGCTGCACCTACTGGCTCTGAGCACGTAGCTGGGGATATGACCAATGATAT 11535 Query 7916 TTCCGGCGCCAGCTTCGTGGATGGTGTGACGAACTTCAGCGCGGAAGCGTTCATCGACGC 7975 || ||| | || | ||| || || | ||||| || | || ||||| ||| | Sbjct 11534 CAAAGGGGCCTCATACGCTGCTGGCGTAACTGATTTCAGTGCAGGGGCTTTCATTGACTC 11475 Query 7976 GACCGCTACCATGGGCGACAGCATGGAAGACCTCACGATGGTGATGGTGCATTCCATCGT 8035 | | ||| ||||| ||||||||||||||||| |||| ||||| ||||| ||||| Sbjct 11474 CGCTGTTACTATGGGTGACAGCATGGAAGACCTTGGATTGGTAATGGTTCATTCTATCGT 11415 >seq5218 Length=8244 Score = 80.6 bits (88), Expect = 1e-10 Identities = 193/292 (66%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 30977 TGTCCCTGCTGGCAGATGCCACGGGATTCCATGCACATGTGTCGCGCCTTAATGACCACA 31036 || ||||| || | | || || |||||||||||||| || ||||| |||| | ||| Sbjct 4251 TGACCCTGTTGCGACACACCGCGCGATTCCATGCACATATGCCGCGCTTTAAGCAGGACA 4310 Query 31037 CCGACGCCCTTGGCTTCCAGGTGCTCGAACAGTGCGTCCGCGATCTGGTCTGTGAGCCGT 31096 || || || || ||| || |||| || | || || ||||| | |||||| ||| Sbjct 4311 CCTACACCAACGGGTTCAAGTGCCTCGTTAAGCGTGTTAGCAATCTGCTGTGTGAGACGT 4370 Query 31097 TCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCC 31156 || |||||||||| || || ||| | || || | | | || |||| || || Sbjct 4371 TCTTGCACTTGCAAACGACGGGCAAATATATCGGTGATTCTACTCAACTTGGACAAACCT 4430 Query 31157 ACGATACGACCGTTCGGAATGTAGCTGATCGTGACCGTGCCGAAGATCGGCGCGAGGTGA 31216 | || ||| | ||||| || || ||| | || ||||| | ||| || | ||| Sbjct 4431 ATTATTTTACCATCGGGAATATAAGCAATTGTGGCGGTTCCGAAAAACGGAGCCATGTGG 4490 Query 31217 TGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTCACCATCTGGTCAT 31268 || || ||||| |||| || ||||| ||| ||||||||||||| Sbjct 4491 TGTTCACAATGACTATAGAAAGGAATGTCCTTAACCACAACCATCTGGTCAT 4542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187157074698432