Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq20357 122 3e-23 >seq20357 Length=552 Score = 122 bits (134), Expect = 3e-23 Identities = 226/325 (70%), Gaps = 14/325 (4%) Strand=Plus/Minus Query 39015 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGA 39074 ||||||||| | |||||||| | ||||| ||| || |||||||| | || |||| ||| Sbjct 476 GCCGCCATGAATTCGGCCGGATGGTGCGCCTTGAGCCACGCCGTGTGATAAGCGAGGAGC 417 Query 39075 CCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCC 39134 |||| || || | ||||| |||||||||| |||| || ||||| | | || ||| Sbjct 416 GCGTAAGCGGCCGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAAGTCG 357 Query 39135 CACA------CCGCCTGGATGGCACCGTCCGAGTAGCC-TCGCTCGCGCGCTCCCTTCTG 39187 | |||||| | || | || ||| ||| | |||| ||| || | | Sbjct 356 AAGGTTTCGTCCGCCTTT-TCGCGC-GT--GAG--GCCGTTTTTCGC-CGCGCCTTCCGC 304 Query 39188 GAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAG 39247 |||| || || | |||||||| |||||||||||||||||||||| || || || || Sbjct 303 GAAGATCTCGCGGTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATCGCGCGACGCAG 244 Query 39248 AAGGTCGGCCTGACCCAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTC 39307 | |||||| || || ||| || ||| |||||| ||| || | ||||||||| Sbjct 243 CAAGTCGGCGCCGCCGAGCGAGTAGCCGCCGATGATCTGCGCCATCTGCATCACCTGCTC 184 Query 39308 CTGGTAGATGACCAGCCCGTAGGTC 39332 |||||||| | | ||||||||| Sbjct 183 CTGGTAGACCATGATGCCGTAGGTC 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160027485070536