Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq33794 147 1e-30 seq16528 127 1e-24 seq38469 102 5e-17 >seq33794 Length=347 Score = 147 bits (162), Expect = 1e-30 Identities = 196/270 (73%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 96805 GCTATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTC 96864 ||| || |||| ||||||||||||||| || | ||||| ||| | ||| ||||| ||||| Sbjct 42 GCTTTCGGGGTTATAAACTTCGTCGCGGTAGATAAACAGGATGACGTCAGCGTCTTGCTC 101 Query 96865 AATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAG 96924 || | || |||||||| || || || | ||||| ||||| |||| || ||||| | Sbjct 102 GATACCGCCCGATTCACGCAAGTCCGACATGACCGGGCGTTTATCCGGTCGTTGTTCGAC 161 Query 96925 CGATCGATTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTT 96984 |||||| || || |||| ||| | ||||||||| | | |||||| |||| || || Sbjct 162 ACTTCGATTGAGCTGCGACAGTGCAATCACCGGTACGTTGAGTTCCTTTGCCAGTGCTTT 221 Query 96985 CAGTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATC-TTGCAGCTCCGGGACGC 97043 | ||||| || || |||| |||||| | ||||| || ||| || | || | Sbjct 222 TAACGAGCGTGATATTTCGGATATTTCCGTGGCGCGGTTTTCGGTGCTACTACCGGTC-T 280 Query 97044 GCATAAGTTGCAGGTAGTCGATCATAATCA 97073 ||||||| ||||| || ||||| |||| || Sbjct 281 GCATAAGCTGCAGATAATCGATGATAACCA 310 >seq16528 Length=721 Score = 127 bits (140), Expect = 1e-24 Identities = 219/317 (69%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 96698 GCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGG 96757 || |||||||| || || | ||||| ||| |||| | | | |||||| ||||| ||| Sbjct 391 GCGTAGTTATCGAAGCGGGTGTATTTACCGGTAAAGGTTAGCCGCACCGTACCAATCGGG 450 Query 96758 CCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTA---TCCGGG 96814 || |||| ||| || || ||||| || || || || || || ||| | || | Sbjct 451 CCGTTTCTTTGTTTGCCAATAATAACTTCTGCCATACCTTTG---TCGGGAGAGTCTTCG 507 Query 96815 TGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCT 96874 | ||| ||||| |||||||| | || || || | || || |||||||| ||||| || Sbjct 508 TTATAGACTTCATCGCGATAGATGAAAATAATAATATCCGCATCCTGCTCGATTGCGCCA 567 Query 96875 GATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTA 96934 |||||||||| ||| || | | || ||||| | | ||| || || | |||||| Sbjct 568 GATTCACGTAGATCAGACATAATAGGGCGTTTATTGGGACGTTGCTCTAAACTTCGATTG 627 Query 96935 AGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGA 96994 || ||||| | || | | || || |||||| || ||||| | ||||||||||| Sbjct 628 AGCTGTGAAAGGGCAATGATGGGGACGCTTAATTCTTTTGCCAAGCCTTTCAGTGAGCGT 687 Query 96995 GAAATCTCGGCAATTTC 97011 ||||| || | ||||| Sbjct 688 GAAATTTCTGAGATTTC 704 >seq38469 Length=310 Score = 102 bits (112), Expect = 5e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 96827 TCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAA 96886 || ||||||| ||||||||| | || ||||||||||| || ||||| ||||| || | Sbjct 95 TCCCGATACACAAACATGATGACATCGGCGTCCTGCTCGATGGCTCCCGATTCTCGCAGG 154 Query 96887 TCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAAT 96946 || || | | || |||||||| | || ||| || || ||||| || ||||||| | Sbjct 155 TCGGACATCATGGGACGTTTGTCGGTGCGACTTTCGAGAGAACGATTTAGCTGTGACAGT 214 Query 96947 GCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATCTC 97002 || |||||||| | || || || |||| ||||||| ||| || || ||||| Sbjct 215 GCAACCACCGGCAAGCTCAACTCTTTGGCCAGAGCCTTCAATGAACGGGAGATCTC 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330658895520442