Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1300 131 4e-25 seq7865 98.7 2e-15 >seq1300 Length=83366 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || |||||||||||||| || ||||||||||| |||| | ||| | |||||| Sbjct 8103 AGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCT 8044 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||||||||| || | ||| || |||| | |||||| ||||| || Sbjct 8043 TCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCC 7984 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || || | || | || ||| || ||||||||| | || || || Sbjct 7983 TGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGTC 7924 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| ||||| Sbjct 7923 TTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 Score = 129 bits (142), Expect = 1e-24 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || |||||||||||||| || ||||||||||| |||| | ||| | |||||| Sbjct 7875 AGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCT 7816 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| || | ||| || |||| | |||||| ||||| | Sbjct 7815 TCCAGCTGCTTT--CCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGT 7758 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || ||||| || || | || | |||||| || ||||||||| | || || | Sbjct 7757 CCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACTTCCAAGGTGATGG 7698 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || || ||||| || |||| |||||| || Sbjct 7697 TCTTACCAGTCAGGGTCTTTACAAAGATCTGCATATT 7661 >seq7865 Length=4356 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| ||||| |||||||| || ||||||||||| || | ||| | |||||| Sbjct 3609 AGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3668 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| | ||||||||| || | | ||| || || || ||| Sbjct 3669 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCCTCTTTGTCT 3728 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | || |||||| ||||| || || ||| Sbjct 3729 TGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTACCTCAAGGGTGATGGTT 3788 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| |||| |||||| Sbjct 3789 TTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| |||||||| || ||||||||||| || | ||| | |||||| Sbjct 3381 AGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3440 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| | ||||||||| |||| | ||| || || || ||| Sbjct 3441 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCCTCTTTGTCT 3500 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| | || | || ||| ||| || ||||| || || Sbjct 3501 TGGATCTTGGCCTTCACATTTTCAATCGAATC---ACTTGCCTCGACCTCAAGGGTGATG 3557 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || ||||| || ||||| |||| |||||| Sbjct 3558 GTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152939905774877