Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1300 145 7e-30 seq7865 87.8 2e-12 >seq1300 Length=83366 Score = 145 bits (160), Expect = 7e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || || || ||||||||| ||||| |||||||| Sbjct 7891 GCCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 7832 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||| |||||||| |||||||||||||| |||| ||| Sbjct 7831 CAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGG 7772 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 | | |||||||||| |||||| |||| ||| || | |||| | ||| | Sbjct 7771 GATTCCCTCCTTGTCCTGGATTTTGGCCTTC-ACGTTTTCAATGCTGTCAGATGCCTCTA 7713 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | |||| || || || ||||| ||||| |||||||| || |||||||| || Sbjct 7712 CTTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCATATT 7661 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || || ||||||||| ||||| |||||||| || ||||| | || || Sbjct 8100 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCTTCC 8041 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || |||||||| |||||||||||||| |||| ||| | | |||||||||| | Sbjct 8040 AGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGG 7981 Query 41774 ATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 ||||| |||| ||| || | ||| | ||| || || | || || || || Sbjct 7980 ATTTTGGCCTTC-ACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGTCTT 7922 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| || |||||| Sbjct 7921 GCCAGTCAGGGTCTTGACGAAGATTTGCATG 7891 >seq7865 Length=4356 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||| Sbjct 3366 CCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3425 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| || || |||| | ||| || |||| ||| Sbjct 3426 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGG 3485 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || ||| ||||| ||| || ||||| | | || || | ||| ||| Sbjct 3486 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACTTGCCTCGACC 3545 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || || |||||||| || || || || || || ||||||||| Sbjct 3546 TCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCATG 3593 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || || ||||||||| ||||| ||||| Sbjct 3593 GCCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACT 3652 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||| || || |||| | ||| || || | ||| Sbjct 3653 CAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGG 3712 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || ||| ||||| ||| || ||||| | | ||||| | ||| || Sbjct 3713 GATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTAC 3772 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || |||||||| || || || || || || ||||||||| Sbjct 3773 CTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCATG 3821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461959658644400