Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq96271 111 1e-19 seq96269 111 1e-19 >seq96271 Length=453 Score = 111 bits (122), Expect = 1e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 97047 AGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGG 97106 ||| ||||||||||| | ||||| || |||||||| | || || | ||| || ||||| Sbjct 196 AGCTTCAATGTGATTTAAATAAACATGTGCATCTCCCAGTGTATGGACAAAGTCACCAGG 137 Query 97107 AACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAA 97166 ||| || |||||| || |||| | || | || ||||| || ||||||||||| Sbjct 136 CTTTAACCCACAGACATGTGCTATCAGGAATGTCAGAAGGGAATAACTGGCAATGTTAAA 77 Query 97167 AGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT 97225 || || || || ||||| || | ||||||||||| | |||||| || |||| ||||| Sbjct 76 GGGTACACCCAGGCCCATGTCCCCGGATCTTTGATAGAGCTGACAAGAGAGCTCTCCAT 18 >seq96269 Length=446 Score = 111 bits (122), Expect = 1e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 97047 AGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGG 97106 ||| ||||||||||| | ||||| || |||||||| | || || | ||| || ||||| Sbjct 251 AGCTTCAATGTGATTTAAATAAACATGTGCATCTCCCAGTGTATGGACAAAGTCACCAGG 310 Query 97107 AACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAA 97166 ||| || |||||| || |||| | || | || ||||| || ||||||||||| Sbjct 311 CTTTAACCCACAGACATGTGCTATCAGGAATGTCAGAAGGGAATAACTGGCAATGTTAAA 370 Query 97167 AGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT 97225 || || || || ||||| || | ||||||||||| | |||||| || |||| ||||| Sbjct 371 GGGTACACCCAGGCCCATGTCCCCGGATCTTTGATAGAGCTGACAAGAGAGCTCTCCAT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345714594869960