Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq143707 98.7 8e-16 >seq143707 Length=308 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| || || || || | ||||| || || || || | || || ||| | Sbjct 259 CATCATGCAGATCTTCGTGAAGACTCTGACCGGTAAGACTATCACTCTTGAAGTTGAACC 200 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 ||||||||| | || | ||| ||| || || | ||||||||| | ||| || Sbjct 199 AAGCGACAGTATCGAGAATGTGAAGACGAAGATCCAAGACAAAGAAGGCATCCCGCCCGA 140 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 || || ||| | || | || ||||||||||| |||||| | ||| ||| || || Sbjct 139 TCAACAGCGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGCCGTACTCTGAGTGACTA 80 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCA 25034 || ||| ||||||||| |||| ||||| Sbjct 79 CAACATTCAGAAAGAGTCCACTCTTCA 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417014043013760