Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09-
07] 253,028 sequences; 167,153,529 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq119668 125 7e-24
seq119667 118 1e-21
seq113039 114 1e-20
seq130988 113 4e-20
seq149518 104 2e-17
seq143707 104 2e-17
seq149517 102 8e-17
seq149514 102 8e-17
seq130990 102 8e-17
seq72878 102 8e-17
seq100540 96.9 3e-15
seq119665 93.3 4e-14
seq119663 93.3 4e-14
seq108713 93.3 4e-14
seq119672 91.5 1e-13
seq119671 91.5 1e-13
seq113038 91.5 1e-13
seq113036 89.7 5e-13
seq187602 84.2 2e-11
seq187601 84.2 2e-11
seq187600 84.2 2e-11
seq130989 84.2 2e-11
seq113037 84.2 2e-11
seq87097 84.2 2e-11
seq99092 82.4 8e-11
>seq119668
Length=339
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||||| ||| | || ||||||| || ||||| ||||| ||||| || || |||
Sbjct 314 CCTCCTCGTAGACGGAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCACTC 255
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| |||||||| || ||||| |||| ||||| ||||| || || ||
Sbjct 254 AGAGTGCGTCCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 195
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| | || | || | | ||| | ||||||| || ||| ||
Sbjct 194 ATGCCCTCCTTGTCT-TGAATCTTGGCCTTGACGTTTTCGATAGTGTCGGAGGCCTCGAC 136
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||||||||| | || || ||||| || |||||
Sbjct 135 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 88
>seq119667
Length=392
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || |||| ||| | ||| | |||| || || || || ||||| || ||||||||
Sbjct 251 GCCTCCACGTAGACGAAGAACAAGATGAAGGGTGGATTCCTTCTGAATATTGTAATCGCT 192
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| || | ||||| |||||||| || ||| |||| || ||||| || ||||| ||
Sbjct 191 CAGGGTACGACCATCTTCTAGCTGTTTCCCGGCAAAGATAAGGCGTTGTTGGTCGGGCGG 132
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCA 139715
|| ||||| ||||| ||| | || || || | | || | || || | ||||||||
Sbjct 131 GATTCCTTCCTTGTCC-TGAATCTTGGTCTTCACATTGTCAATAGTATCAGAGGGCTCCA 73
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||| ||| | || || ||||| | ||| || |||||||| |||||
Sbjct 72 CCTCAAGGGTAATGGTTTTCCCGGTTAGCGTCTTCACGAATATCTGCAT 24
>seq113039
Length=388
Score = 114 bits (126), Expect = 1e-20
Identities = 161/224 (72%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || ||||| | ||| | ||||| || ||||| || || |||||||| ||||||
Sbjct 167 CCTCCACGCAAACGAAGAACGAGGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCGCTC 226
Query 139598 ATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655
| || |||| |||||| ||||| || | ||| |||| ||||| ||||| || ||||
Sbjct 227 AGGGT--TCGACCGTCTTCCAGCTGCTTGTCGGCAAAGATGAGACGCTGCTGGTCTGGAG 284
Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715
| || ||||||||||| ||| || || | | || | |||||| | || ||||
Sbjct 285 GGATACCTTCTTTGTCCTGGATCTTGGTCTTCACGTTGTCGATAGTGTCGCTTGGTTCCA 344
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATT 139759
|||||| || | || || ||||||| || || ||||| |||
Sbjct 345 CCTCAAGAGTGATGGTTTTTCCGGTCAGAGTCTTCACGAAAATT 388
>seq130988
Length=550
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || |||||||| || ||||||| || | ||||| ||||| || |||
Sbjct 296 GTTGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCCAGCTGCTTGCCA 237
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| ||||| ||||| || ||||| || ||||||||||| ||| || ||
Sbjct 236 GCAAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCTTTGTCCTGGATCTTGGTCTTC 177
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | |||||| | || |||||||||| || | || || ||||||| ||
Sbjct 176 ACGTTGTCGATAGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTTTTTCCGGTCAGAGTC 117
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| ||||||||
Sbjct 116 TTCACGAAAATTTGCAT 100
>seq149518
Length=270
Score = 104 bits (114), Expect = 2e-17
Identities = 157/221 (71%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCG 139607
||||| || | |||| || ||||| || || ||||||||||| || | || | ||
Sbjct 268 ACGCAGCACAAGATGAAGGGTGGACTCCTTCTGGATGTTATAATCACTAAGAGTTCGTCC 209
Query 139608 AGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 139667
| ||||| ||||||||||||||| | |||| | |||||| || || || || ||||| |
Sbjct 208 A-TCTTCAAGCTGTTTACCAGCAAAAATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCT 150
Query 139668 TGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727
|||| ||| ||| ||| | | || | | ||| | || || ||||||| ||| |
Sbjct 149 TGTCTTGGATCTTTGTTTTGACATTCTCAATAGAGTCACTAGGTTCAACCTCAAGGGTGA 90
Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| || || |||| ||||| ||||| || ||||| |||
Sbjct 89 TGGTTTTCCCCGTCAGAGTTTTCACGAAGATCTGCATGGCT 49
>seq143707
Length=308
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || || | ||| | ||||| || |||||||| |||||||| || || |||
Sbjct 29 CCACCTCTCAAGCGAAGAACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCACTC 88
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| || ||||| ||||| | || ||||| || |||||||| ||
Sbjct 89 AGAGTACGGCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCGGGCGGG 148
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| ||| || || | | || | ||||| | || || ||
Sbjct 149 ATGCCTTCTTTGTCTTGGATCTTCGTCTTCACATTCTCGATACTGTCGCTTGGTTCAACT 208
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| || | ||||| ||||||| || || ||||| || |||||
Sbjct 209 TCAAGAGTGATAGTCTTACCGGTCAGAGTCTTCACGAAGATCTGCAT 255
>seq149517
Length=289
Score = 102 bits (112), Expect = 8e-17
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| || || ||||||||||| || | || | || | ||||| |||||
Sbjct 255 TGAAGGGTGGACTCCTTCTGGATGTTATAATCACTAAGAGTTCGTCCA-TCTTCAAGCTG 197
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|||||||||| | |||| | |||||| || || || || ||||| ||||| ||| ||
Sbjct 196 TTTACCAGCAAAAATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTT 137
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| ||| | | || | | ||| | || || ||||||| ||| | || || || ||
Sbjct 136 TGTTTTGACATTCTCAATAGAGTCACTAGGTTCAACCTCAAGGGTGATGGTTTTCCCCGT 77
Query 139741 CAACGTTTTTACGAATATTTGCATAGCT 139768
|| ||||| ||||| || ||||| |||
Sbjct 76 CAGAGTTTTCACGAAGATCTGCATGGCT 49
>seq149514
Length=710
Score = 102 bits (112), Expect = 8e-17
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| || || ||||||||||| || | || | || | ||||| |||||
Sbjct 255 TGAAGGGTGGACTCCTTCTGGATGTTATAATCACTAAGAGTTCGTCCA-TCTTCAAGCTG 197
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|||||||||| | |||| | |||||| || || || || ||||| ||||| ||| ||
Sbjct 196 TTTACCAGCAAAAATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTT 137
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| ||| | | || | | ||| | || || ||||||| ||| | || || || ||
Sbjct 136 TGTTTTGACATTCTCAATAGAGTCACTAGGTTCAACCTCAAGGGTGATGGTTTTCCCCGT 77
Query 139741 CAACGTTTTTACGAATATTTGCATAGCT 139768
|| ||||| ||||| || ||||| |||
Sbjct 76 CAGAGTTTTCACGAAGATCTGCATGGCT 49
>seq130990
Length=350
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620
||||| || |||| || || ||||| || || |||| || | ||||| |||||
Sbjct 303 GTGAAGGGTCAACTCCTTCTGGATGTTGTAGTCCCTCAAGGTTCGGCCATCTTCCAGCTG 244
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| |||| ||||| ||||| || ||||| || ||||||||||| ||| ||
Sbjct 243 CTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCTTTGTCCTGGATCTT 184
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|| | | || | |||||| | || |||||||||| || | || || |||||
Sbjct 183 GGTCTTCACGTTGTCGATAGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTTTTTCCGGT 124
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
|| || || ||||| ||||||||
Sbjct 123 CAGAGTCTTCACGAAAATTTGCAT 100
>seq72878
Length=280
Score = 102 bits (112), Expect = 8e-17
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| || || ||||||||||| || | || | || | ||||| |||||
Sbjct 29 TGAAGGGTGGACTCCTTCTGGATGTTATAATCACTAAGAGTTCGTCCA-TCTTCAAGCTG 87
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|||||||||| | |||| | |||||| || || || || ||||| ||||| ||| ||
Sbjct 88 TTTACCAGCAAAAATCAATCTTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTT 147
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| ||| | | || | | ||| | || || ||||||| ||| | || || || ||
Sbjct 148 TGTTTTGACATTCTCAATAGAGTCACTAGGTTCAACCTCAAGGGTGATGGTTTTCCCCGT 207
Query 139741 CAACGTTTTTACGAATATTTGCATAGCT 139768
|| ||||| ||||| || ||||| |||
Sbjct 208 CAGAGTTTTCACGAAGATCTGCATGGCT 235
>seq100540
Length=300
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
|||||||||||| || || || |||| || |||||||| |||||||| ||||| || ||
Sbjct 36 GTCTTCGAGCTGCTTGCCTGCGAAGATAAGGCGTTGCTGGTCGGGAGGGATGCCCTCCTT 95
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
||| ||| || || || | | || | | ||| | | ||| || || | || |
Sbjct 96 GTCCTGGATCTTCTGCTTGACGTTCTCGATCGAGTCCGACGACTCGACGTCGAGCGTGAT 155
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||||||||||||||| || ||||| || |||||
Sbjct 156 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 191
>seq119665
Length=456
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | |||||| || || || | ||| ||||| || ||||||||||| || |
Sbjct 263 CCTCCACGAAGACGCAAGACCAAATGCAGCGTTGACTCCTTCTGAATGTTATAGTCAGAC 204
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | | ||| || ||||| || ||||| | ||||| || || || || |||||
Sbjct 203 AGTGTTCGCCCGTCCTCAAGCTGCTTCCCAGCGAAAATCAGGCGCTGTTGGTCAGGAGGG 144
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| | || | || | | ||| | ||||| | | ||| ||
Sbjct 143 ATACCCTCCTTGTC-CTGAATCTTAGCCTTCACGTTTTCGATGGTGTCTGAAGCCTCAAC 85
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||||||| |||| || || ||||| || |||||
Sbjct 84 TTCCAGTGTGATCGTCTTGCCTGTCAGTGTCTTAACGAAAATCTGCAT 37
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632
|||||| || ||||| || ||| || || | ||| || |||||||| || ||| |
Sbjct 456 CTCTTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCCTCAAGCTGTTTGCCCGCAAA 397
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692
|||||| || || || || ||||| |||||||| ||||| ||| | || | || |
Sbjct 396 GATCAGGCGCTGTTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTGGCCTTCACAT 338
Query 139693 T-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751
| || | || |||| |||||| || || | || | || || ||||||||||| || |
Sbjct 337 TCTCGATGGTATCGGAGGGCTCGACATCCAACGTAATGGTTTTCCCGGTCAACGTCTTGA 278
Query 139752 CGAATATTTGCATAGCT 139768
| || || |||||| ||
Sbjct 277 CAAAGATCTGCATACCT 261
>seq119663
Length=482
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | |||||| || || || | ||| ||||| || ||||||||||| || |
Sbjct 289 CCTCCACGAAGACGCAAGACCAAATGCAGCGTTGACTCCTTCTGAATGTTATAGTCAGAC 230
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | | ||| || ||||| || ||||| | ||||| || || || || |||||
Sbjct 229 AGTGTTCGCCCGTCCTCAAGCTGCTTCCCAGCGAAAATCAGGCGCTGTTGGTCAGGAGGG 170
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || ||||| ||| | || | || | | ||| | ||||| | | ||| ||
Sbjct 169 ATACCCTCCTTGTC-CTGAATCTTAGCCTTCACGTTTTCGATGGTGTCTGAAGCCTCAAC 111
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||||||| |||| || || ||||| || |||||
Sbjct 110 TTCCAGTGTGATCGTCTTGCCTGTCAGTGTCTTAACGAAAATCTGCAT 63
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632
|||||| || ||||| || ||| || || | ||| || |||||||| || ||| |
Sbjct 482 CTCTTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCCTCAAGCTGTTTGCCCGCAAA 423
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692
|||||| || || || || ||||| |||||||| ||||| ||| | || | || |
Sbjct 422 GATCAGGCGCTGTTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTGGCCTTCACAT 364
Query 139693 T-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751
| || | || |||| |||||| || || | || | || || ||||||||||| || |
Sbjct 363 TCTCGATGGTATCGGAGGGCTCGACATCCAACGTAATGGTTTTCCCGGTCAACGTCTTGA 304
Query 139752 CGAATATTTGCATAGCT 139768
| || || |||||| ||
Sbjct 303 CAAAGATCTGCATACCT 287
>seq108713
Length=694
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| || ||| | |||| ||||| | |||||| |||
Sbjct 454 GTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAACTGTTTCCCA 513
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
|| | ||||||||||| ||||||||||| || ||||||||||| ||| |||| | ||
Sbjct 514 GCGAAAATCAGACGTTGTTGATCGGGAGGGATACCTTCTTTGTC-TTGAATTTTGGCCTT 572
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | ||| | || || ||| ||| ||||||| ||| | || || || || | ||
Sbjct 573 CACATTTTCAATAGTATCACTGGCCTCAACCTCAAGGGTGATGGTTTTACCCGTGAGAGT 632
Query 139747 TTTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 633 CTTCACAAAGATCTGCAT 650
>seq119672
Length=247
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| || |||| || ||||| ||||| ||||| |||||||| | ||||| ||| ||
Sbjct 204 ACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTGAGTGTGCGTCCGTCCTCT 145
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
|| ||||| || ||| |||| || || ||||| ||||| || || || || ||||| |
Sbjct 144 AGTTGTTTTCCTGCAAAGATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGG 85
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || || | | ||| | || || | | |||||||| | || | ||||||
Sbjct 84 ATCTTGGCCTTGACGTTTTCGATCGTATCTGAAGCTTCCACCTCGAGAGTAATGGTCTTG 25
Query 139736 CCGGTCAACGTTTTTACGAATAT 139758
||||||| || || ||||| ||
Sbjct 24 CCGGTCAGGGTCTTGACGAAAAT 2
>seq119671
Length=274
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||||| || ||||| ||||| ||||| || ||||||| ||||
Sbjct 195 CGCAGTACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCA 136
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||||||||| || ||||| |||| ||||| || || || || || || || || |||
Sbjct 135 TCTTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGTTGGTCTGGCGGAATACCCTCCTTG 76
Query 139670 TCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| |||| | ||| | | ||| | ||||| | || || ||||| | ||| |
Sbjct 75 TC-TTGAATTTTGGCCTTAACGTTTTCGATAGTGTCAGAGGCTTCGACCTCGAGGGTGAT 17
Query 139729 CGTCTTGCCGGTCA 139742
|| || |||||||
Sbjct 16 GGTTTTTCCGGTCA 3
>seq113038
Length=405
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| || | ||||| || || || || || ||||| || || ||
Sbjct 175 CCACCACGAAGACGCAGCACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCACTG 234
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | || || | ||| || |||||| |||| || || ||||| || |||||
Sbjct 235 AGGGTACGGCCATCCTCCAACTGCTTTCCAGCAAAGATGAGTCGCTGCTGGTCTGGAGGG 294
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||| | || ||| ||
Sbjct 295 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCAGAGGCCTCAACT 354
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | |||||||| ||||||||||| ||||| || ||||||
Sbjct 355 TCCAGGGTGATGGTCTTGCCTGTCAACGTTTTGACGAAGATCTGCATA 402
>seq113036
Length=461
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || |||||||| || ||||||| || | ||||| ||||| || ||
Sbjct 207 GTTGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCCAGCTGCTTTCCG 266
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TT 139686
||| | || ||||||||||| || || || || || || ||||| || | || || ||
Sbjct 267 GCAAAAATGAGACGTTGCTGGTCCGGTGGGATACCCTCCTTGTC-CTGTATCTTGGTCTT 325
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| | |||||||| || | ||| | ||||| || |||| |||
Sbjct 326 CACGTTGTCAATGGTGTCACTTGGCTCCACTTCCAAGGTTATGGTCTTTCCCGTCAGCGT 385
Query 139747 TTTTACGAATATTTGCAT 139764
|| || || ||||||||
Sbjct 386 CTTGACAAAGATTTGCAT 403
>seq187602
Length=2693
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 153622 ATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATT 153681
||||||||| |||| || ||||| || || || ||| ||| || || || || |
Sbjct 1138 ATTTGTTGAGTGCAAGTGAGGCCAAATTACAGACAGCAACTTCATCTGGACTGCTGTACT 1079
Query 153682 GTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTT 153741
|| ||||| | || | |||||||||||| || || ||| |||||| || |
Sbjct 1078 CCACAATTTCTGTGCAAAGATTGCTGCATTTGATGGTTCCAACATTCTGTTGATTACTCT 1019
Query 153742 TGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787
| | ||| ||||| || ||||||| ||||||||| ||||| |||||
Sbjct 1018 TTCTGTTGCAAGCATCTTTGTATAACATGTATGGAGTGCCTGTTTC 973
>seq187601
Length=2838
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 153622 ATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATT 153681
||||||||| |||| || ||||| || || || ||| ||| || || || || |
Sbjct 1548 ATTTGTTGAGTGCAAGTGAGGCCAAATTACAGACAGCAACTTCATCTGGACTGCTGTACT 1607
Query 153682 GTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTT 153741
|| ||||| | || | |||||||||||| || || ||| |||||| || |
Sbjct 1608 CCACAATTTCTGTGCAAAGATTGCTGCATTTGATGGTTCCAACATTCTGTTGATTACTCT 1667
Query 153742 TGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787
| | ||| ||||| || ||||||| ||||||||| ||||| |||||
Sbjct 1668 TTCTGTTGCAAGCATCTTTGTATAACATGTATGGAGTGCCTGTTTC 1713
>seq187600
Length=3805
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 153622 ATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATT 153681
||||||||| |||| || ||||| || || || ||| ||| || || || || |
Sbjct 1138 ATTTGTTGAGTGCAAGTGAGGCCAAATTACAGACAGCAACTTCATCTGGACTGCTGTACT 1079
Query 153682 GTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTT 153741
|| ||||| | || | |||||||||||| || || ||| |||||| || |
Sbjct 1078 CCACAATTTCTGTGCAAAGATTGCTGCATTTGATGGTTCCAACATTCTGTTGATTACTCT 1019
Query 153742 TGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787
| | ||| ||||| || ||||||| ||||||||| ||||| |||||
Sbjct 1018 TTCTGTTGCAAGCATCTTTGTATAACATGTATGGAGTGCCTGTTTC 973
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 153622 ATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATT 153681
||||||||| |||| || ||||| || || || ||| ||| || || || || |
Sbjct 2515 ATTTGTTGAGTGCAAGTGAGGCCAAATTACAGACAGCAACTTCATCTGGACTGCTGTACT 2574
Query 153682 GTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTT 153741
|| ||||| | || | |||||||||||| || || ||| |||||| || |
Sbjct 2575 CCACAATTTCTGTGCAAAGATTGCTGCATTTGATGGTTCCAACATTCTGTTGATTACTCT 2634
Query 153742 TGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787
| | ||| ||||| || ||||||| ||||||||| ||||| |||||
Sbjct 2635 TTCTGTTGCAAGCATCTTTGTATAACATGTATGGAGTGCCTGTTTC 2680
>seq130989
Length=538
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || |||||||| || ||||||| || | ||||| ||||| || ||
Sbjct 284 GTTGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCCAGCTGCTTTCCG 225
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TT 139686
||| | || ||||||||||| || || || || || || ||||| || | || || ||
Sbjct 224 GCAAAAATGAGACGTTGCTGGTCCGGTGGGATACCCTCCTTGTC-CTGTATCTTGGTCTT 166
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| | |||||||| |||| || | |||||| || |||| ||
Sbjct 165 CACGTTGTCAATGGTGTCACTTGGCTCCACTTCAAGAGTGATCGTCTTTCCTGTCAGTGT 106
Query 139747 TTTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 105 CTTGACAAAGATCTGCAT 88
>seq113037
Length=419
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || |||||||| || ||||||| || | ||||| ||||| || ||
Sbjct 207 GTTGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCCAGCTGCTTTCCG 266
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TT 139686
||| | || ||||||||||| || || || || || || ||||| || | || || ||
Sbjct 267 GCAAAAATGAGACGTTGCTGGTCCGGTGGGATACCCTCCTTGTC-CTGTATCTTGGTCTT 325
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| | |||||||| || | ||| | ||||| || |||| |||
Sbjct 326 CACGTTGTCAATGGTGTCACTTGGCTCCACTTCCAAGGTTATGGTCTTTCCCGTCAGCGT 385
Query 139747 TTTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 386 CTTGACAAAGATCTGCAT 403
>seq87097
Length=552
Score = 84.2 bits (92), Expect = 2e-11
Identities = 113/155 (73%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| || ||| | |||| ||||| | |||||| |||
Sbjct 154 GTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCTTCCAACTGTTTCCCA 95
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
|| | ||||||||||| ||||||||||| || ||||||||||| ||| |||| | ||
Sbjct 94 GCGAAAATCAGACGTTGTTGATCGGGAGGGATACCTTCTTTGTC-TTGAATTTTGGCCTT 36
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAA 139721
| | ||| | || || ||| ||| |||||||
Sbjct 35 CACATTTTCAATAGTATCACTGGCCTCAACCTCAA 1
>seq99092
Length=231
Score = 82.4 bits (90), Expect = 8e-11
Identities = 111/151 (74%), Gaps = 3/151 (2%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| |||||| || ||||| || | || || ||||||||||| ||||||||
Sbjct 206 CCACCTCTTAAACGTAATACTAAATGCAATGTTGATTCTTTTTGAATATTATAATCAGAT 147
Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| ||| | || | ||||| | |||||||| ||| | || | | ||| || || || ||
Sbjct 146 AATGTACGTCCA-TCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGTTCTGGTGG 88
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||||||| || ||| |||||| |||
Sbjct 87 TATTCCTTCTTTATC-TTGAATTTTTGCTTT 58
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494495023977600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |