Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq249402 105 5e-18 >seq249402 Length=214 Score = 105 bits (116), Expect = 5e-18 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 99376 CGCGAGGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTC 99435 |||| ||||||||| |||||| ||||| || | ||| ||||| || ||||||||||| Sbjct 121 CGCGTTGGCACGTTGGCCTTGATCAGGCCGGTAATCACGTCCACCGACGGCCGCTGCGTT 62 Query 99436 GCCAGGACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGG 99483 ||||| || ||||| | ||| ||||| ||||||||||| ||||| ||| Sbjct 61 GCCAGCACCAGATGCAGGCCAGCCGCGCGCGCCTTCTGGGCGATCCGG 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353549558836008