Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09-
07] 253,028 sequences; 167,153,529 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq174639 329 5e-85
seq75038 300 3e-76
seq12672 269 4e-67
seq174641 197 2e-45
seq75039 197 2e-45
seq157111 188 1e-42
seq157110 188 1e-42
seq148981 179 6e-40
seq148980 179 6e-40
seq25321 174 3e-38
seq174640 136 6e-27
seq251946 116 6e-21
seq174642 98.7 2e-15
>seq174639
Length=919
Score = 329 bits (364), Expect = 5e-85
Identities = 537/766 (70%), Gaps = 12/766 (2%)
Strand=Plus/Plus
Query 211604 TCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACA--TG 211661
|||| |||| || |||||| | || ||| |||| |||| || || | |||| ||
Sbjct 112 TCTACATTGGGTGCTTTGGTATCCTAATGTTCCC---TCTTTTAACTTTAGCAACTATTG 168
Query 211662 CTT-TATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAG 211720
||| |||| ||| || || |||||| | || ||||| || ||||| | |||||||
Sbjct 169 CTTATATCACAGCTTTTATTCTTGCACCTGCAGTAGATATTGATGGAATAAGAGAACCAG 228
Query 211721 TAGCTGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAA 211780
||||||| ||| | | ||||| || ||||| || | || || || | ||| ||| |
Sbjct 229 TAGCTGGCTCACTTCTTTATGGCAATAACATTATAACAGGAGCTGTAATACCAAGTTCTA 288
Query 211781 ACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCT 211840
| || || || | || |||||||| | ||||| || |||||||||| | |
Sbjct 289 ATGCTATTGGGGTTCATTTCTATCCAGTTTGGGAGTCAAATGGATTTGATGAGTGCTTAT 348
Query 211841 ACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACA 211900
| ||||||||| | || || || ||| | | || || | | || | | | |
Sbjct 349 ATAATGGTGGTACATATCAATTTGTAGTACTTCATTTTATGCTTGGTGTTGCTTGTTGGA 408
Query 211901 TGGGAAGACAGTGGGAACTTTCA--TACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGC 211958
|||| ||| | |||||| |||| | | | ||||||||| | || ||||| | ||| ||
Sbjct 409 TGGGTAGAGAATGGGAA--TTCAGTTTCAGATTAGGTATGAGACCATGGATATTTGTAGC 466
Query 211959 TTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGG 212018
|| ||||||||||| ||||||||| || ||||| ||||||| ||| | ||||| |
Sbjct 467 TTTCTCAGCACCTGTTGTAGCAGCTTTTGCAGTATTTGTTGTTTATCCAATTGGTCAAGC 526
Query 212019 TTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATT 212078
| || || || || ||||||||||| ||| ||||| || || || ||| | || ||
Sbjct 527 TAGCTTTTCCGATGGAATGCCTTTAGGAATAAGTGGAACTTTTAATTTTATGCTTGTGTT 586
Query 212079 CCAAGCAGAACATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTT 212138
|||||||||||||||||| | ||||| ||||||||||| ||| || || ||| | ||
Sbjct 587 CCAAGCAGAACATAACATTTTAATGCATCCATTCCATATCCTAGGAGTAGCTGGTGTATT 646
Query 212139 CGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGA 212198
|| || ||||||| ||| ||||| ||||| | ||||||||||||||| | ||
Sbjct 647 TGGAGGTTCATTATTTAGTGCAATGCATGGTTCATTAGTTACATCTTCACTTCTTGCAGA 706
Query 212199 AACCACTGGTTTAGATTCACAGAACT-ATGGTTACAAGTTCGGACAAGAAGAAGAGACAT 212257
||| | || | ||| | || | ||| || ||||| || |||||||| || || |
Sbjct 707 AACTGCAGG-AGATATTAGCCTAAATGTTGGATATAAGTTTGGTCAAGAAGATGAAACTT 765
Query 212258 ATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCA 212317
||| ||| || || ||||| || || |||||||| || || || ||||| || ||||
Sbjct 766 ATAGCATATCAGCAGCCCATGGTTATTTTGGTAGACTCATATTTCAATATGCTTCCTTCA 825
Query 212318 ACAACAGCAGAAGTTTACACTTCTTCCTCGCATCATGGCCTGTTAT 212363
| ||| | ||| | ||||||||||| ||| | ||||| |||||
Sbjct 826 ATAACTCTCGTAGTCTTCACTTCTTCCTAGCAGCTTGGCCAGTTAT 871
>seq75038
Length=481
Score = 300 bits (332), Expect = 3e-76
Identities = 355/481 (74%), Gaps = 0/481 (0%)
Strand=Plus/Minus
Query 211928 GTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCG 211987
|| |||| ||||| |||||||| ||| |||||||||| || || |||| || |
Sbjct 481 GTCTAGGAATGCGCCCTTGGATTGCTGTAGCTTATTCAGGTCCAGTTGCAGCTGCGACTG 422
Query 211988 CTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTA 212047
| ||||| | |||||||| | ||||| || ||||| || || || ||||||||||| |
Sbjct 421 CGGTATTTTTAATTTACCCAATTGGTCAAGGATCATTTTCGGATGGAATGCCTTTAGGAA 362
Query 212048 TATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCACC 212107
| |||||||| ||||| || ||| | || ||||||||||| ||||| || | ||||| |
Sbjct 361 TTTCAGGAACTTTCAATTTTATGATTGTTTTCCAAGCAGAGCATAATATTTTAATGCATC 302
Query 212108 CATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACG 212167
| || |||||| |||||| || ||| |||| ||||| ||||||| ||||||||||| |
Sbjct 301 CTTTTCATATGTTAGGTGTAGCTGGTGTGTTTGGTGGTTCATTATTTTCTGCTATGCATG 242
Query 212168 GTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATG 212227
|||| | ||||| || ||| | || |||||||| |||| || ||| || ||
Sbjct 241 GTTCATTGGTTACTTCATCATTAATTCGTGAAACAACTGAAAATGAATCAACAAATGCTG 182
Query 212228 GTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCG 212287
|||| | ||||||||||||||||| ||||||||||| || || |||||||| || || |
Sbjct 181 GTTATAGATTCGGACAAGAAGAAGAAACATATAACATTGTAGCAGCACATGGTTATTTTG 122
Query 212288 GTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTCG 212347
|| | | || ||||| ||||| || ||||| ||| | |||||| |||||| | |
Sbjct 121 GTCGTTTAATTTTCCAATATGCTTCTTTCAATAACTCACGCTCTTTACATTTCTTCTTAG 62
Query 212348 CATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCA 212407
| |||||||| | | | ||||| || ||| | || || | ||||||||||| |
Sbjct 61 CTATTTGGCCTGTAGTTGGAATTTGGTTCACTTCTTTAGGAATTTCAACAATGGCATTTA 2
Query 212408 A 212408
|
Sbjct 1 A 1
>seq12672
Length=424
Score = 269 bits (298), Expect = 4e-67
Identities = 313/422 (74%), Gaps = 0/422 (0%)
Strand=Plus/Plus
Query 211987 GCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGT 212046
|| ||||| | |||||||| | ||||| || ||||| || || || |||||||||||
Sbjct 3 GCGGTATTTTTAATTTACCCAATTGGTCAAGGATCATTTTCGGATGGAATGCCTTTAGGA 62
Query 212047 ATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCAC 212106
|| |||||||| ||||| || ||| | || ||||||||||| ||||| || | |||||
Sbjct 63 ATTTCAGGAACTTTCAATTTTATGATTGTTTTCCAAGCAGAGCATAATATTTTAATGCAT 122
Query 212107 CCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCAC 212166
|| || |||||| |||||| || ||| |||| ||||| ||||||| |||||||||||
Sbjct 123 CCTTTTCATATGTTAGGTGTAGCTGGTGTGTTTGGTGGTTCATTATTTTCTGCTATGCAT 182
Query 212167 GGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTAT 212226
||||| | ||||| || ||| | || |||||||| |||| || ||| || |
Sbjct 183 GGTTCATTGGTTACTTCATCATTAATTCGTGAAACAACTGAAAATGAATCAACAAATGCT 242
Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286
||||| | ||||||||||||||||| ||||||||||| || || |||||||| || ||
Sbjct 243 GGTTATAGATTCGGACAAGAAGAAGAAACATATAACATTGTAGCAGCACATGGTTATTTT 302
Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346
||| | | || ||||| ||||| || ||||| ||| | |||||| |||||| |
Sbjct 303 GGTCGTTTAATTTTCCAATATGCTTCTTTCAATAACTCACGCTCTTTACATTTCTTCTTA 362
Query 212347 GCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 212406
|| |||||||| | | | ||||| || ||| | || || | |||||||||||
Sbjct 363 GCTATTTGGCCTGTAGTTGGAATTTGGTTCACTTCTTTAGGAATTTCAACAATGGCATTT 422
Query 212407 AA 212408
||
Sbjct 423 AA 424
>seq174641
Length=312
Score = 197 bits (218), Expect = 2e-45
Identities = 220/292 (75%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 211901 TGGGAAGACAGTGGGAACTTTCA--TACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGC 211958
|||| ||| | |||||| |||| | | | ||||||||| | || ||||| | ||| ||
Sbjct 312 TGGGTAGAGAATGGGAA--TTCAGTTTCAGATTAGGTATGAGACCATGGATATTTGTAGC 255
Query 211959 TTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGG 212018
|| ||||||||||| ||||||||| || ||||| ||||||| ||| | ||||| |
Sbjct 254 TTTCTCAGCACCTGTTGTAGCAGCTTTTGCAGTATTTGTTGTTTATCCAATTGGTCAAGC 195
Query 212019 TTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATT 212078
| || || || || ||||||||||| ||| ||||| || || || ||| | || ||
Sbjct 194 TAGCTTTTCCGATGGAATGCCTTTAGGAATAAGTGGAACTTTTAATTTTATGCTTGTGTT 135
Query 212079 CCAAGCAGAACATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTT 212138
|||||||||||||||||| | ||||| ||||||||||| ||| || || ||| | ||
Sbjct 134 CCAAGCAGAACATAACATTTTAATGCATCCATTCCATATCCTAGGAGTAGCTGGTGTATT 75
Query 212139 CGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTT 212190
|| || ||||||| ||| ||||| ||||| | |||||||||||||||
Sbjct 74 TGGAGGTTCATTATTTAGTGCAATGCATGGTTCATTAGTTACATCTTCACTT 23
>seq75039
Length=421
Score = 197 bits (218), Expect = 2e-45
Identities = 259/359 (72%), Gaps = 0/359 (0%)
Strand=Plus/Minus
Query 211591 ACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCT 211650
||| | ||| || | ||| ||||||||||||| ||| ||||| ||| | | || |
Sbjct 360 ACAGATAACCGATTATATATTGGTTGGTTTGGAGTTTGCATGATTCCAACTTTATTAACA 301
Query 211651 GCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATC 211710
|| || | ||||| | || || | || |||||||| || ||||| || |||||
Sbjct 300 GCTACCTCTGTATTTATTATTGCTTTTGTTGCTGCACCTCCAGTAGATATTGATGGAATT 241
Query 211711 CGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTT 211770
|||||||| || |||||||||| | ||||| ||||| || || | || || || ||
Sbjct 240 CGTGAACCTGTTTCTGGTTCATTATTATATGGAAACAATATTATTACAGGGGCTATTATT 181
Query 211771 CCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGAT 211830
|| ||||||||||||| |||||||| || ||||| || |||||||| || || | |||
Sbjct 180 CCTACTTCAAACGCAATTGGTTTACATTTTTATCCAATTTGGGAAGCTGCTTCTTTAGAT 121
Query 211831 GAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATC 211890
|| ||||| || |||||||| ||||| || || | | | |||||| | | |||||
Sbjct 120 GAATGGCTATATAATGGTGGACCTTATCAATTAATTGTTTGCCACTTTTTCTTAGGAATT 61
Query 211891 TCAGCATACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGAT 211949
| || |||||| | | ||||||||||| | ||| |||| ||||| ||||||||
Sbjct 60 TGTTGCTATATGGGACGTGAATGGGAACTTTCGTTTCGTCTAGGAATGCGCCCTTGGAT 2
>seq157111
Length=1651
Score = 188 bits (208), Expect = 1e-42
Identities = 503/767 (66%), Gaps = 40/767 (5%)
Strand=Plus/Plus
Query 193430 GAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCT 193489
|||| ||| |||| || || |||||||| |||||||| || || ||||| || || ||
Sbjct 125 GAAAGTAGCTCTAATCACGGGTATAACTGGCCAGGATGGCTCATACCTTGCTGAATTGCT 184
Query 193490 TTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCC--CTAAT-CAATAC 193546
| || || || ||||| || ||||| ||| |||| || ||| || | ||||||
Sbjct 185 GCTCTCAAAAGGTTATGAGGTGCATGGAATTATAAGACGA---TCCAGCTCTTTCAATAC 241
Query 193547 TCATAGAATTGATCATATCTATGA-GA----AGATCACT-------------------CT 193582
| |||||| ||| | |||| || || |||| ||
Sbjct 242 TGGGAGAATTTCTCACCTATATGCTGATTCCAGGTCACATATAATGGGAGCCATGAAACT 301
Query 193583 TCATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACC 193642
|||||||| || || ||||| | ||| | | | |||| | ||| | ||
Sbjct 302 ACATTATGGCGACCTCACTGACAGTACAAACCTAGTAAAAATTATTAATGAGGTTAAGCC 361
Query 193643 TGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGA 193702
||||| | |||||| | || || ||||| ||||| || ||||| ||||| | | ||
Sbjct 362 AACTGAGGTTTATAATTTAGGAGCACAAAGCCATGTGAAGGTTTCATTTGATTTAGCTGA 421
Query 193703 GTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTT 193762
|||||| ||||||||||||| | ||||| || ||| | | || ||| | | |
Sbjct 422 ATATACTGCTAATGTTGATGCCGTTGGAACACTAAGACTTTTGGATGCAATCAAAACATG 481
Query 193763 GGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822
|||||||| || |||| | |||||||||| ||||| || || ||||||| ||
Sbjct 482 TGGAATGGAAAACACTGTTAGATTCTATCAGGCTTCTACAAGTGAGATGTATGGAAAAGT 541
Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882
| || | ||||| | |||| || |||||| |||| | ||||||||||| | |||
Sbjct 542 CCAAGAAATTCCACAGACTGAAAAGACCCCATTTTATCCCAGGTCTCCTTATGGAGCAGC 601
Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTC-----ATATGGATTCCAC 193937
|| |||||| || ||||| | |||||| | || | |||| | || ||
Sbjct 602 CAAAGTGTATGCTTTCTGGATTGTTGTAAATTATAGAGAAGCCTACAATAT-GTTTGCAA 660
Query 193938 GCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACT 193997
| | ||| || || |||||||||||| |||| | |||||||| || ||||||||
Sbjct 661 CCAA----TGGAATCCTGTTCAATCACGAAAGTCCACGTAGAGGTGAAACTTTTGTAACA 716
Query 193998 CGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTT 194057
| ||||| || || | |||| || | | ||||| || | | ||| | |||
Sbjct 717 AGGAAGATAACGAGAGCAGTGGCTAAAATTCATTTAGGATTTCAAGATAAGCTTGAACTT 776
Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|| ||||| | | || || || |||||||| || | ||||||||||| || ||||||
Sbjct 777 GGAAATCTGGACTCCAAAAGAGACTGGGGACATGCCAGAGATTATGTTGAGGCCATGTGG 836
Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
| || || || || || | || || || | |||| | || || ||
Sbjct 837 CTTATTTTACAGCATGAACAGCCAGAGGACTTTGTGGTGGCAACTGG 883
>seq157110
Length=1672
Score = 188 bits (208), Expect = 1e-42
Identities = 503/767 (66%), Gaps = 40/767 (5%)
Strand=Plus/Plus
Query 193430 GAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCT 193489
|||| ||| |||| || || |||||||| |||||||| || || ||||| || || ||
Sbjct 125 GAAAGTAGCTCTAATCACGGGTATAACTGGCCAGGATGGCTCATACCTTGCTGAATTGCT 184
Query 193490 TTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCC--CTAAT-CAATAC 193546
| || || || ||||| || ||||| ||| |||| || ||| || | ||||||
Sbjct 185 GCTCTCAAAAGGTTATGAGGTGCATGGAATTATAAGACGA---TCCAGCTCTTTCAATAC 241
Query 193547 TCATAGAATTGATCATATCTATGA-GA----AGATCACT-------------------CT 193582
| |||||| ||| | |||| || || |||| ||
Sbjct 242 TGGGAGAATTTCTCACCTATATGCTGATTCCAGGTCACATATAATGGGAGCCATGAAACT 301
Query 193583 TCATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACC 193642
|||||||| || || ||||| | ||| | | | |||| | ||| | ||
Sbjct 302 ACATTATGGCGACCTCACTGACAGTACAAACCTAGTAAAAATTATTAATGAGGTTAAGCC 361
Query 193643 TGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGA 193702
||||| | |||||| | || || ||||| ||||| || ||||| ||||| | | ||
Sbjct 362 AACTGAGGTTTATAATTTAGGAGCACAAAGCCATGTGAAGGTTTCATTTGATTTAGCTGA 421
Query 193703 GTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTT 193762
|||||| ||||||||||||| | ||||| || ||| | | || ||| | | |
Sbjct 422 ATATACTGCTAATGTTGATGCCGTTGGAACACTAAGACTTTTGGATGCAATCAAAACATG 481
Query 193763 GGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822
|||||||| || |||| | |||||||||| ||||| || || ||||||| ||
Sbjct 482 TGGAATGGAAAACACTGTTAGATTCTATCAGGCTTCTACAAGTGAGATGTATGGAAAAGT 541
Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882
| || | ||||| | |||| || |||||| |||| | ||||||||||| | |||
Sbjct 542 CCAAGAAATTCCACAGACTGAAAAGACCCCATTTTATCCCAGGTCTCCTTATGGAGCAGC 601
Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTC-----ATATGGATTCCAC 193937
|| |||||| || ||||| | |||||| | || | |||| | || ||
Sbjct 602 CAAAGTGTATGCTTTCTGGATTGTTGTAAATTATAGAGAAGCCTACAATAT-GTTTGCAA 660
Query 193938 GCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACT 193997
| | ||| || || |||||||||||| |||| | |||||||| || ||||||||
Sbjct 661 CCAA----TGGAATCCTGTTCAATCACGAAAGTCCACGTAGAGGTGAAACTTTTGTAACA 716
Query 193998 CGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTT 194057
| ||||| || || | |||| || | | ||||| || | | ||| | |||
Sbjct 717 AGGAAGATAACGAGAGCAGTGGCTAAAATTCATTTAGGATTTCAAGATAAGCTTGAACTT 776
Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|| ||||| | | || || || |||||||| || | ||||||||||| || ||||||
Sbjct 777 GGAAATCTGGACTCCAAAAGAGACTGGGGACATGCCAGAGATTATGTTGAGGCCATGTGG 836
Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
| || || || || || | || || || | |||| | || || ||
Sbjct 837 CTTATTTTACAGCATGAACAGCCAGAGGACTTTGTGGTGGCAACTGG 883
>seq148981
Length=1183
Score = 179 bits (198), Expect = 6e-40
Identities = 501/767 (65%), Gaps = 40/767 (5%)
Strand=Plus/Minus
Query 193430 GAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCT 193489
|||| ||| |||| || || |||||||| |||||||| || || ||||| || || ||
Sbjct 1157 GAAAGTAGCTCTAATCACGGGTATAACTGGCCAGGATGGCTCATACCTTGCTGAATTGCT 1098
Query 193490 TTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCC--CTAAT-CAATAC 193546
| || || || ||||| || ||||| ||| |||| || ||| || | ||||||
Sbjct 1097 GCTCTCAAAAGGTTATGAGGTGCATGGAATTATAAGACGA---TCCAGCTCTTTCAATAC 1041
Query 193547 TCATAGAATTGATCATATCTATGA-GA----AGATCACT-------------------CT 193582
| |||||| ||| | |||| || || |||| ||
Sbjct 1040 TGGGAGAATTTCTCACCTATATGCTGATTCCAGGTCACATATAATGGGAGCCATGAAACT 981
Query 193583 TCATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACC 193642
|||||||| || || ||||| | ||| | | | |||| | ||| | ||
Sbjct 980 ACATTATGGCGACCTCACTGACAGTACAAACCTAGTAAAAATTATTAATGAGGTTAAGCC 921
Query 193643 TGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGA 193702
||||| | |||||| | || || ||||| ||||| || ||||| ||||| | | ||
Sbjct 920 AACTGAGGTTTATAATTTAGGAGCACAAAGCCATGTGAAGGTTTCATTTGATTTAGCTGA 861
Query 193703 GTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTT 193762
|||||| ||||||||||||| | ||||| || ||| | | || ||| | | |
Sbjct 860 ATATACTGCTAATGTTGATGCCGTTGGAACACTAAGACTTTTGGATGCAATCAAAACATG 801
Query 193763 GGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822
|||||||| || |||| | |||||||||| ||||| || || ||||||| ||
Sbjct 800 TGGAATGGAAAACACTGTTAGATTCTATCAGGCTTCTACGAGTGAGATGTATGGAAAAGT 741
Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882
| | | ||||| | |||| || |||||| |||| | ||||||||||| | |||
Sbjct 740 CCATGAAATTCCACAGACTGAAAAGACCCCATTTTATCCCAGGTCTCCTTATGGAGCAGC 681
Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTC-----ATATGGATTCCAC 193937
|| |||||| || ||||| | |||||| | || | |||| | || ||
Sbjct 680 CAAAGTGTATGCTTTCTGGATTGTTGTAAATTATAGAGAAGCCTACAATAT-GTTTGCAA 622
Query 193938 GCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACT 193997
| | ||| || || |||||||||||| |||| | |||||||| || ||||||||
Sbjct 621 CCAA----TGGAATCCTGTTCAATCACGAAAGTCCACGTAGAGGTGAAACTTTTGTAACA 566
Query 193998 CGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTT 194057
| ||||| || || | |||| || | | ||| | || | | ||| | |||
Sbjct 565 AGGAAGATAACGAGAGCAGTGGCTAAAATTCATTTAGGACTTCAAGATAAGCTTGAACTT 506
Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|| ||||| | | || || || |||||||| || | ||||||||||| || ||||||
Sbjct 505 GGAAATCTGGACTCCAAAAGAGACTGGGGACATGCCAGAGATTATGTTGAGGCCATGTGG 446
Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
| || || || || || | || || || | |||| | || || ||
Sbjct 445 CTTATTTTACAGCATGAACAGCCAGAGGACTTTGTGGTGGCAACTGG 399
>seq148980
Length=1560
Score = 179 bits (198), Expect = 6e-40
Identities = 501/767 (65%), Gaps = 40/767 (5%)
Strand=Plus/Minus
Query 193430 GAAAAAAGCATTAATAACAGGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCT 193489
|||| ||| |||| || || |||||||| |||||||| || || ||||| || || ||
Sbjct 1534 GAAAGTAGCTCTAATCACGGGTATAACTGGCCAGGATGGCTCATACCTTGCTGAATTGCT 1475
Query 193490 TTTGTCTAAGGGATATGAAGTTCATGGTATTGTAAGGAGAAGTTCC--CTAAT-CAATAC 193546
| || || || ||||| || ||||| ||| |||| || ||| || | ||||||
Sbjct 1474 GCTCTCAAAAGGTTATGAGGTGCATGGAATTATAAGACGA---TCCAGCTCTTTCAATAC 1418
Query 193547 TCATAGAATTGATCATATCTATGA-GA----AGATCACT-------------------CT 193582
| |||||| ||| | |||| || || |||| ||
Sbjct 1417 TGGGAGAATTTCTCACCTATATGCTGATTCCAGGTCACATATAATGGGAGCCATGAAACT 1358
Query 193583 TCATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGTCATTAGGGCAGTTGAACC 193642
|||||||| || || ||||| | ||| | | | |||| | ||| | ||
Sbjct 1357 ACATTATGGCGACCTCACTGACAGTACAAACCTAGTAAAAATTATTAATGAGGTTAAGCC 1298
Query 193643 TGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGA 193702
||||| | |||||| | || || ||||| ||||| || ||||| ||||| | | ||
Sbjct 1297 AACTGAGGTTTATAATTTAGGAGCACAAAGCCATGTGAAGGTTTCATTTGATTTAGCTGA 1238
Query 193703 GTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTT 193762
|||||| ||||||||||||| | ||||| || ||| | | || ||| | | |
Sbjct 1237 ATATACTGCTAATGTTGATGCCGTTGGAACACTAAGACTTTTGGATGCAATCAAAACATG 1178
Query 193763 GGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822
|||||||| || |||| | |||||||||| ||||| || || ||||||| ||
Sbjct 1177 TGGAATGGAAAACACTGTTAGATTCTATCAGGCTTCTACGAGTGAGATGTATGGAAAAGT 1118
Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882
| | | ||||| | |||| || |||||| |||| | ||||||||||| | |||
Sbjct 1117 CCATGAAATTCCACAGACTGAAAAGACCCCATTTTATCCCAGGTCTCCTTATGGAGCAGC 1058
Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTC-----ATATGGATTCCAC 193937
|| |||||| || ||||| | |||||| | || | |||| | || ||
Sbjct 1057 CAAAGTGTATGCTTTCTGGATTGTTGTAAATTATAGAGAAGCCTACAATAT-GTTTGCAA 999
Query 193938 GCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACT 193997
| | ||| || || |||||||||||| |||| | |||||||| || ||||||||
Sbjct 998 CCAA----TGGAATCCTGTTCAATCACGAAAGTCCACGTAGAGGTGAAACTTTTGTAACA 943
Query 193998 CGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTT 194057
| ||||| || || | |||| || | | ||| | || | | ||| | |||
Sbjct 942 AGGAAGATAACGAGAGCAGTGGCTAAAATTCATTTAGGACTTCAAGATAAGCTTGAACTT 883
Query 194058 GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGG 194117
|| ||||| | | || || || |||||||| || | ||||||||||| || ||||||
Sbjct 882 GGAAATCTGGACTCCAAAAGAGACTGGGGACATGCCAGAGATTATGTTGAGGCCATGTGG 823
Query 194118 TTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGG 194164
| || || || || || | || || || | |||| | || || ||
Sbjct 822 CTTATTTTACAGCATGAACAGCCAGAGGACTTTGTGGTGGCAACTGG 776
>seq25321
Length=478
Score = 174 bits (192), Expect = 3e-38
Identities = 236/329 (72%), Gaps = 0/329 (0%)
Strand=Plus/Plus
Query 211591 ACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCT 211650
||| | ||| || | ||| ||||||||||||| ||| ||||| ||| | | || |
Sbjct 150 ACAGATAACCGATTATATATTGGTTGGTTTGGAGTTTGCATGATTCCAACTTTATTAACA 209
Query 211651 GCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATC 211710
|| || | ||||| | || || | || |||||||| |||||||| || |||||
Sbjct 210 GCTACCTCTGTATTTATTATTGCTTTTGTTGCTGCACCTCCAGTTGATATTGATGGAATT 269
Query 211711 CGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTT 211770
|||||||| || |||||||||| | ||||| ||||| || || | || || || ||
Sbjct 270 CGTGAACCTGTTTCTGGTTCATTATTATATGGAAACAATATTATTACAGGGGCTATTATT 329
Query 211771 CCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGAT 211830
|| ||||||||||||| |||||||| || ||||| || |||||||| || || | |||
Sbjct 330 CCTACTTCAAACGCAATTGGTTTACATTTTTATCCAATTTGGGAAGCTGCTTCTTTAGAT 389
Query 211831 GAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATC 211890
|| ||||| || |||||||| ||||| || || | | | |||||| | | |||||
Sbjct 390 GAATGGCTATATAATGGTGGACCTTATCAATTAATTGTTTGCCACTTTTTCTTAGGAATT 449
Query 211891 TCAGCATACATGGGAAGACAGTGGGAACT 211919
| || |||||| | | ||||||||
Sbjct 450 TGTTGCTATATGGGACGTGAATGGGAACT 478
>seq174640
Length=289
Score = 136 bits (150), Expect = 6e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 212226 TGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTT 212285
||| || ||||| || |||||||| || || |||| ||| || || ||||| || ||
Sbjct 256 TGGATATAAGTTTGGTCAAGAAGATGAAACTTATAGCATATCAGCAGCCCATGGTTATTT 197
Query 212286 CGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCT 212345
|||||||| || || || ||||| || ||||| ||| | ||| | |||||||||||
Sbjct 196 TGGTAGACTCATATTTCAATATGCTTCCTTCAATAACTCTCGTAGTCTTCACTTCTTCCT 137
Query 212346 CGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATT 212405
||| | ||||| ||||| || | ||||| || | | || | | |||||||| ||
Sbjct 136 AGCAGCTTGGCCAGTTATTGGTATTTGGTTCACAGCACTTGGAGTAAGTACAATGGCTTT 77
Query 212406 CAACCTAAATGGATTCAACTTCAACCAATC 212435
|||| ||||||| || ||||||||||||||
Sbjct 76 CAACTTAAATGGTTTAAACTTCAACCAATC 47
>seq251946
Length=233
Score = 116 bits (128), Expect = 6e-21
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 211795 CACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCT 211854
||||| ||||| || |||||||| ||| || | ||||| ||| | || |||||||| |||
Sbjct 228 CACTTTTATCCAATTTGGGAAGCTGCATCTTTAGATGAATGGTTATATAATGGTGGCCCT 169
Query 211855 TACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACAGTGG 211914
|| | ||| | | | || || | | || ||| || || || | |||||
Sbjct 168 TATGAATTGATTGTGCTACATTTTTTATTAGGGGTCTGTTGTTATATTGGTCGTGAGTGG 109
Query 211915 GAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTA 211974
||||| || ||||||||||||||||| ||||||| |||||||| | |||||||||
Sbjct 108 GAACTAAGTTATCGTTTAGGTATGCGTCCATGGATCTCTGTTGCTTTCACGGCACCTGTA 49
Query 211975 TCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGG 212018
||||||| || || || ||||| || ||| | ||||| ||
Sbjct 48 GCAGCAGCAGCAGCAGTTTTTCTTGTATATCCAATTGGTCAAGG 5
>seq174642
Length=303
Score = 98.7 bits (108), Expect = 2e-15
Identities = 183/266 (69%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 211604 TCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACA--TG 211661
|||| |||| || |||||| | || ||| |||| |||| || || | |||| ||
Sbjct 297 TCTACATTGGGTGCTTTGGTATCCTAATGTTCCC---TCTTTTAACTTTAGCAACTATTG 241
Query 211662 CTT-TATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAG 211720
||| |||| ||| || || |||||| | || ||||| || ||||| | |||||||
Sbjct 240 CTTATATCACAGCTTTTATTCTTGCACCTGCAGTAGATATTGATGGAATAAGAGAACCAG 181
Query 211721 TAGCTGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAA 211780
||||||| ||| | | ||||| || ||||| || | || || || | ||| ||| |
Sbjct 180 TAGCTGGCTCACTTCTTTATGGCAATAACATTATAACAGGAGCTGTAATACCAAGTTCTA 121
Query 211781 ACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCT 211840
| || || || | || |||||||| | ||||| || |||||||||| | |
Sbjct 120 ATGCTATTGGGGTTCATTTCTATCCAGTTTGGGAGTCAAATGGATTTGATGAGTGCTTAT 61
Query 211841 ACAATGGTGGTCCTTACCAGTTGGTA 211866
| ||||||||| | || || || |||
Sbjct 60 ATAATGGTGGTACATATCAATTTGTA 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 805001024035680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |