Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09-
07] 253,028 sequences; 167,153,529 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq157111 109 1e-18
seq157110 109 1e-18
>seq157111
Length=1651
Score = 109 bits (120), Expect = 1e-18
Identities = 244/361 (68%), Gaps = 4/361 (1%)
Strand=Plus/Plus
Query 68421 GAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGA 68480
||| ||||||||||||| ||||||||||| ||||| ||||| || || |||||||| |
Sbjct 525 GAGATGTATGGAAAAGTCCAAGAAATTCCACAGACTGAAAAGACCCCATTTTATCCCAGG 584
Query 68481 AGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCG 68540
||||| || | || || |||| |||| ||||| | |||||| | || |
Sbjct 585 TCTCCTTATGGAGCAGCCAAAGTGTATGCTTTCTGGATTGTTGTAAATTATAGAGAAGCC 644
Query 68541 TATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGAGTCCCAACAGAGGCCA 68599
|| || |||| || | ||| | || | | ||||||||||| ||||| ||||| |
Sbjct 645 TACAATATGTTTGCAACCAA-TGGAATCCTGTTCAATCACGAAAGTCCACGTAGAGGTGA 703
Query 68600 TCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT-TTCAATGGTGTCGAAA 68658
|| || || | || || |||| | || || || ||| | | | | || | |
Sbjct 704 AACTTTTGTAACAAGGAAGATAACGAGAGCAGTGGCTAAAATTCATTTAGGATTTCAAGA 763
Query 68659 AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACG 68718
| || || | || || ||| | || |||||||||| |||||| |||| | ||||| |
Sbjct 764 TAAGCTTG-AACTTGGAAATCTGGACTCCAAAAGAGACTGGGGACATGCCAGAGATTATG 822
Query 68719 TAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAG 68778
| || || |||||| | || | || || || || || |||| |||| | ||||| |
Sbjct 823 TTGAGGCCATGTGGCTTATTTTACAGCATGAACAGCCAGAGGACTTTGTGGTGGCAACTG 882
Query 68779 G 68779
|
Sbjct 883 G 883
>seq157110
Length=1672
Score = 109 bits (120), Expect = 1e-18
Identities = 244/361 (68%), Gaps = 4/361 (1%)
Strand=Plus/Plus
Query 68421 GAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGA 68480
||| ||||||||||||| ||||||||||| ||||| ||||| || || |||||||| |
Sbjct 525 GAGATGTATGGAAAAGTCCAAGAAATTCCACAGACTGAAAAGACCCCATTTTATCCCAGG 584
Query 68481 AGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCG 68540
||||| || | || || |||| |||| ||||| | |||||| | || |
Sbjct 585 TCTCCTTATGGAGCAGCCAAAGTGTATGCTTTCTGGATTGTTGTAAATTATAGAGAAGCC 644
Query 68541 TATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGAGTCCCAACAGAGGCCA 68599
|| || |||| || | ||| | || | | ||||||||||| ||||| ||||| |
Sbjct 645 TACAATATGTTTGCAACCAA-TGGAATCCTGTTCAATCACGAAAGTCCACGTAGAGGTGA 703
Query 68600 TCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT-TTCAATGGTGTCGAAA 68658
|| || || | || || |||| | || || || ||| | | | | || | |
Sbjct 704 AACTTTTGTAACAAGGAAGATAACGAGAGCAGTGGCTAAAATTCATTTAGGATTTCAAGA 763
Query 68659 AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACG 68718
| || || | || || ||| | || |||||||||| |||||| |||| | ||||| |
Sbjct 764 TAAGCTTG-AACTTGGAAATCTGGACTCCAAAAGAGACTGGGGACATGCCAGAGATTATG 822
Query 68719 TAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAG 68778
| || || |||||| | || | || || || || || |||| |||| | ||||| |
Sbjct 823 TTGAGGCCATGTGGCTTATTTTACAGCATGAACAGCCAGAGGACTTTGTGGTGGCAACTG 882
Query 68779 G 68779
|
Sbjct 883 G 883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1099304549891800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |