Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq99092 91.5 1e-13 >seq99092 Length=231 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||||| | ||| |||||||| || ||||||||| ||||||||||| | Sbjct 206 CCACCTCTTAAACGTAATACTAAATGCAATGTTGATTCTTTTTGAATATTATAATCAGAT 147 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || |||||||| || |||| ||||| | || || || | ||| Sbjct 146 AATGTACGTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGTTCTGGTGGT 87 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC-TGCGCTTTCCAC 39671 | |||||||| || |||||| ||| | | | ||| || | || ||| || Sbjct 86 ATTCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTGAATTGTATCATTTGC-TTCAAC 28 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAA 39698 || || |||||||||||||| ||||| Sbjct 27 ATCTAATGTAATTGTTTTACCTGTTAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346298389009124