Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_019511.1 Length=136326 Score E Sequences producing significant alignments: (Bits) Value seq252629 86.0 5e-12 >seq252629 Length=245 Score = 86.0 bits (94), Expect = 5e-12 Identities = 97/128 (76%), Gaps = 8/128 (6%) Strand=Plus/Plus Query 100737 ACTTAGGATTTAACCTTATACCATCTAACTAATTTTTTCTGATTTCTCAACATTCA---- 100792 ||||||||||||||||||| |||||||||||||||||||| |||| |||| ||| Sbjct 21 ACTTAGGATTTAACCTTATGCCATCTAACTAATTTTTTCTACTTTCGCAACCATCACACT 80 Query 100793 -AGCCTAGTCTTTC-GACTTACTTTGTAGTTTAGTTAGCTTTACGGTGTTCTAGCAATTT 100850 | ||| | |||| | | |||| ||||||||||||||| || ||| |||| || Sbjct 81 CACCCT--TATTTCATGGTCATGTTGTGGTTTAGTTAGCTTTAAGGGTTTCCAGCAGTTC 138 Query 100851 AAGGTATT 100858 || | ||| Sbjct 139 AAAGGATT 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434735833039680