Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq60939 104 1e-17 >seq60939 Length=205 Score = 104 bits (114), Expect = 1e-17 Identities = 135/184 (73%), Gaps = 7/184 (4%) Strand=Plus/Minus Query 78375 TAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGTCCGCACAAA--T 78432 |||||||| || || || | || |||| ||||| |||||||| || | |||||| | Sbjct 182 TAAATATGTGCATCCCCAAAAGTATGAACAAAGTCCCCTACTTCAAG--CTCACAAACTT 125 Query 78433 GCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTCCTAAGAATA 78492 | ||||| || ||| | ||| || || || ||||| ||||| || | |||||||| | Sbjct 124 GTGCAATCATCATTGTTAATAAAGCATAAGATGCAATATTAAAAGGTACCCCTAAGAAAA 65 Query 78493 CGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGATACGTAAAACT 78552 | || | |||| |||||| | ||| ||| || ||||||||| || |||||||||| Sbjct 64 CATCTGCACTTCTTTGGTAAAGTTGACAAGATAACTTTCCATC---TGCCACGTAAAACT 8 Query 78553 GGAA 78556 |||| Sbjct 7 GGAA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299234372970400