Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq96271 132 4e-26 seq96269 132 4e-26 >seq96271 Length=453 Score = 132 bits (146), Expect = 4e-26 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 111696 AAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATG 111755 |||||| | || |||| | |||||||||||||||||||| |||||||| | ||| Sbjct 211 AAGCTGGAGTTTCAAAGCTTCAATGTGATTTAAATAAACATGTGCATCTCCCAGTGTATG 152 Query 111756 GATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTA 111815 || || || | ||||| || ||| || ||||| |||| | |||| || || || Sbjct 151 GACAAAGTCACCAGGCTTTAACCCACAGACATGTGCTATCAGGAATGTCAGAAGGGAATA 92 Query 111816 ACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACA 111875 ||| ||||||||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct 91 ACTGGCAATGTTAAAGGGTACACCCAGGCCCATGTCCCCGGATCTTTGATAGAGCTGACA 32 Query 111876 TGATAG 111881 || || Sbjct 31 AGAGAG 26 >seq96269 Length=446 Score = 132 bits (146), Expect = 4e-26 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 111696 AAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATG 111755 |||||| | || |||| | |||||||||||||||||||| |||||||| | ||| Sbjct 236 AAGCTGGAGTTTCAAAGCTTCAATGTGATTTAAATAAACATGTGCATCTCCCAGTGTATG 295 Query 111756 GATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTA 111815 || || || | ||||| || ||| || ||||| |||| | |||| || || || Sbjct 296 GACAAAGTCACCAGGCTTTAACCCACAGACATGTGCTATCAGGAATGTCAGAAGGGAATA 355 Query 111816 ACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACA 111875 ||| ||||||||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct 356 ACTGGCAATGTTAAAGGGTACACCCAGGCCCATGTCCCCGGATCTTTGATAGAGCTGACA 415 Query 111876 TGATAG 111881 || || Sbjct 416 AGAGAG 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390736926487564