Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_028765.1 Length=142348 Score E Sequences producing significant alignments: (Bits) Value seq252629 98.7 9e-16 >seq252629 Length=245 Score = 98.7 bits (108), Expect = 9e-16 Identities = 110/144 (76%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 53013 AATACCTTAAATTGCTAGAACATCGTAAAGCTAACTAAACTACAACGTAACT-TGAAAGA 53071 ||| | || || |||| ||| | ||||||||||||||| ||||| | || ||||| | Sbjct 146 AATCCTTTGAACTGCTGGAAACCCTTAAAGCTAACTAAACCACAACATGACCATGAAATA 87 Query 53072 ---GTAAACGTGAATGTTGAGAAATCAGAAAAAATTAGTTAGATGGTATATGGTTAAATC 53128 || | |||| |||| |||| |||||||||||||||||||| ||| ||||||||| Sbjct 86 AGGGTGAGTGTGATGGTTGCGAAAGTAGAAAAAATTAGTTAGATGGCATAAGGTTAAATC 27 Query 53129 CTAAGTACTAT-ATAATCGACAAT 53151 |||||| | | ||||| | |||| Sbjct 26 CTAAGTGTTTTGATAATAGGCAAT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453945283655040