Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_028767.1 Length=45653 Score E Sequences producing significant alignments: (Bits) Value seq16240 80.6 8e-11 >seq16240 Length=356 Score = 80.6 bits (88), Expect = 8e-11 Identities = 104/144 (72%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 31908 ATGAAAGCAACCGGAATTGTAAAGAAACTTGACCATTTAGGACGGGTAGTTATCCCGAAA 31967 ||||| |||| || || |||| ||| | ||| | |||||||| || || || |||| Sbjct 140 ATGAAGTCAACGGGTATAGTAAGAAAAGTAGACGAATTAGGACGTGTCGTAATTCCGATT 199 Query 31968 GAACTTCGCGGCACTTTAGGCATTGGTGAAAAAGACGCTCTGGAAATCTATGTAGACGGT 32027 ||| | | | || | | |||| |||||||| || | ||||| ||||||||||| Sbjct 200 GAATTGAGGAGAACACTGGAGATTGCAGAAAAAGATTCTTTAGAAATTTATGTAGACGGA 259 Query 32028 GAGCGCATTATGCTGAAGAAATAT 32051 |||| ||||| || ||||||||| Sbjct 260 GAGCAAATTATTCTAAAGAAATAT 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145529408855640