Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq60939 145 6e-30 >seq60939 Length=205 Score = 145 bits (160), Expect = 6e-30 Identities = 151/194 (78%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 126077 CATA-TGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAA 126135 |||| ||||| ||||||||||||||||| ||||| ||||||| || || || || |||| Sbjct 196 CATAGTGATTTGAATAAATATGTGCATCCCCAAAAGTATGAACAAAGTCCCCTACTTCAA 137 Query 126136 GTCCACATTCTTTTGCAA-CAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGA 126194 | |||| ||| ||||| || || ||| | |||||||||| ||||||||| ||||| Sbjct 136 GCTCACAAACTTGTGCAATCATCAT-TGTTAATAAAGCATAAGATGCAATATTAAAAGGT 78 Query 126195 ACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGT 126254 || ||||| || | ||| ||||||||||| || | ||||||| ||| || || ||| Sbjct 77 ACCCCTAAGAAAACATCTGCACTTCTTTGGTAAAGTTGACAAGATAACTTTCCATCTGCC 18 Query 126255 ACGTAAAATTGAAA 126268 |||||||| || || Sbjct 17 ACGTAAAACTGGAA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407338372936796