Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudodiploria_20strigosa_20[genbank_20GCA_5F000751095.1_202014-09- 07] 253,028 sequences; 167,153,529 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq77635 95.1 9e-15 >seq77635 Length=207 Score = 95.1 bits (104), Expect = 9e-15 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27857 TACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGT 27916 ||||| || ||| |||||| || ||||||||| |||| ||||| ||||| | Sbjct 142 TACAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCTCCAGAGCAACAACGAT 83 Query 27917 TAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAA 27976 | |||||||| ||||||||||| || || | || | || || |||||||||||||||| Sbjct 82 TGATTTTTGCAGGAAAACAATTAGAAGATGGTCGTACATTATCTGATTACAACATCCAAA 23 Query 27977 AAGAGAGCACTTTGCATTTGGT 27998 |||| ||| || ||||| || Sbjct 22 AAGAATCCACATTACATTTAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354764999092956