Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq67374 87.8 2e-12 >seq67374 Length=1687 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| ||||||| | || ||||| ||||| ||| || ||||| || Sbjct 1342 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAACCATCA 1283 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| |||||| || ||||||||| | || ||| ||| Sbjct 1282 GACACCATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGTATCCCACCAGACCAA 1223 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || | || |||||||| || || || |||||||| || | ||| | || |||| Sbjct 1222 CAGCGTCTCATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACACTGAGT--GACTACA 1165 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGT 29170 | || ||||| || |||||||||||| |||| Sbjct 1164 ACATCCAGAAAGAGTCTACTCTTCACTTGGT 1134 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || || ||||||| | || ||||| ||||| ||| || ||||| | Sbjct 1571 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAACCATC 1512 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | || |||||| || ||||||||| | || |||||| Sbjct 1511 AGACACCATTGAAAATGTCAAAGCAAAAATCCAGGACAAAGAAGGTATCCCTCCAGATCA 1452 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTAC 29138 || ||| | |||||||| ||||| || ||||| ||| || | ||| | || || Sbjct 1451 GCAGAGATTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGTACACTGAGT--GACTAT 1394 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGT 29170 || || ||||| ||||||||||||||| |||| Sbjct 1393 AACATCCAGAAAGAATCTACTCTTCACTTGGT 1362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427196633602025