Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq67374 93.3 4e-14 >seq67374 Length=1687 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| || | ||| || || || || ||||||||||| | Sbjct 1344 CCACCACGCAGACGGAGAACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTC 1403 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||||||||| ||||| ||| | || | ||||||||| || || Sbjct 1404 AGTGTACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGG 1463 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||| ||| ||| || | | | || || || || Sbjct 1464 ATACCTTCTTTGTCCTGGATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACC 1523 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | ||| ||||||||||| || | ||||||||||| || |||||| || Sbjct 1524 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCATTATG 1574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421135997785580