Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq30926 86.0 1e-11 >seq30926 Length=14648 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 189464 CAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAG 189523 || || || ||||| | ||||| ||||||||| | ||| | | ||||| ||||| ||| Sbjct 554 CAGATACAAATGGTCAATGAAGGCAAAATGCATGGATTTCTGAGGATGTACTGGGCCAAG 495 Query 189524 AAGATACTTGAATGGACTAGAA-CACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAA 189582 |||||||| |||||||| |||| |||| || | ||| || | | |||||| | || Sbjct 494 AAGATACTGGAATGGAC-AGAATCACCGGAGCAGGCTCTGGAATTTGCCATCTATCTCAA 436 Query 189583 CAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTT-GTATGTGGTCTA 189641 | || || ||||| || || | ||||| || || || || |||| |||| | | || Sbjct 435 TGATAAATATGAACTGGATGGTAGAGATCCCAATGGCTATGTTGGTTAGTATCT-TTTTA 377 Query 189642 TTTGCGGATTAC 189653 |||| || |||| Sbjct 376 TTTG-GGCTTAC 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920678146030200