Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq67374 98.7 8e-16 >seq67374 Length=1687 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| |||||| || |||||||| || ||||||||||| || ||| | |||| Sbjct 675 AGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGGCCATCT 734 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||| || || || ||| |||| || | || ||||| || | |||||||| || Sbjct 735 TCCAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCC 794 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| | || ||||| | ||| |||||| || || |||| ||||||| | Sbjct 795 TGGATTT-TAGCTTTGACATTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGGT 853 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||| || | ||||| ||||| || ||||| Sbjct 854 TTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 886 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| |||||| || |||||||| || ||||||||||| || ||| || |||| Sbjct 447 AGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCT 506 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| || | ||||| || || | ||||||||| || Sbjct 507 TCCAGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 566 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| | || ||||| | ||| ||||| || ||| || | |||||| | Sbjct 567 TGGATTT-TGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGT 625 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||| || | ||||| ||||| || ||||| Sbjct 626 TTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 658 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||||| |||||| || |||||||| || ||||||||||| || ||| || |||| Sbjct 903 AGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCT 962 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||| || || || ||| |||| || | ||||| || || | ||||| || || Sbjct 963 TCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCC 1022 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 |||| |||| ||||| | ||| ||||| || || || | |||||| | Sbjct 1023 TGGATTT-TTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGT 1081 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||| || | ||||| ||||| || ||||| Sbjct 1082 TTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378334951479975