Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6968 84.2 2e-11 >seq6968 Length=116279 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 20922 AGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCT 20981 |||| || || ||||| || ||| || ||||| || |||| ||||| |||||||| Sbjct 48589 AGCAATGGTTCGACGTGATTTGAGTAGACATGGGCATCTCCCATAGTGTGTACAAAGTCG 48530 Query 20982 CCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATG 21041 || || |||| || ||||| || || |||| ||||||| | || ||||||||||| Sbjct 48529 CCTGGTTTCAGACCAGTGACATGCGCTATCATGTACGTCAACAAAGCATAGCTGGCGATA 48470 Query 21042 TTAAACGGGACCCCGAGGccc 21062 || || || || || || ||| Sbjct 48469 TTGAATGGAACTCCAAGACCC 48449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426638123192400