Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq190700 84.2 2e-11 >seq190700 Length=4627 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 22745 TCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCT 22804 || |||| ||||| || ||||| || || | |||||||| |||||||| | || |||| Sbjct 1766 TCGTGGCATTTGCTGCAGTTGAGGGAATCTTCTTTTCTGGATCATTTGCATCAATCTTCT 1707 Query 22805 GGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTG 22864 || ||||||||||| |||||||| || ||| | || ||||| || | || ||| | | Sbjct 1706 GGTTGAAGAAACGTGGTCTCATGCCTGGCTTGACTTTCTCCAATGAACTTATCAGCAGAG 1647 Query 22865 ACGA 22868 | || Sbjct 1646 ATGA 1643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355286024746765