Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq67374 91.5 1e-13 >seq67374 Length=1687 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||| || || ||||| || |||||||| || || || | | | ||||| Sbjct 1134 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 1193 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || || || ||||| | || | ||| |||||||| ||| || ||||||||||| Sbjct 1194 AACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGG 1253 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| ||| | || ||||| || ||| || || | ||| ||||| || Sbjct 1254 ATTTTTGCCTTAACATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTTG 1313 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || || || |||||| Sbjct 1314 CCAGTGAGGGTTTTGACGAAGATCTGCATA 1343 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||| || || ||||| || |||||||| || || || | | | ||||| Sbjct 906 ACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 965 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGT-CACA 15273 || || || ||||| | || | ||| |||||||| ||| || |||||||||| | Sbjct 966 AACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGG 1025 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 | ||||||| || || | || ||||| || ||| || || | || |||||||| Sbjct 1026 ATTTTTGCT-TTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTT 1084 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||| || |||||| Sbjct 1085 GCCAGTGAGGGTTTTGACAAAGATCTGCATA 1115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361215809552955