Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq67374 105 6e-18 seq30926 95.1 1e-14 >seq67374 Length=1687 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || |||||| | ||||| ||||| | ||||| || | |||||| | || | ||| | Sbjct 1574 CATAATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAACC 1515 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||| || | |||||| ||| || ||||||||||| || ||||| || Sbjct 1514 ATCAGACACCATTGAAAATGTCAAAGCAAAAATCCAGGACAAAGAAGGTATCCCTCCAGA 1455 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||| | || | | ||||| || || || |||| | | | | || ||||| Sbjct 1454 TCAGCAGAGATTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGTACACTGAGTGACTA 1395 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||| || |||||||||||| | || |||| || Sbjct 1394 TAACATCCAGAAAGAATCTACTCTTCACTTGGTTCT 1359 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| ||| | ||||| | || | ||| || Sbjct 658 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTGGAGGTCGAACCATCA 599 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | |||||| || || ||||| ||||| || ||||| || ||| Sbjct 598 GACACCATTGAGAACGTCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCAA 539 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | | || || || || ||||||| | | | | || ||||| ||| Sbjct 538 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACACTGAGTGACTACAAC 479 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||||||| | || |||| || Sbjct 478 ATCCAGAAAGAATCTACTCTTCACTTGGTACT 447 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| ||| | ||||| | || | ||| || Sbjct 1114 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTGGAGGTTGAACCATCA 1055 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | |||||| ||| || ||||||||||| || || || || ||| Sbjct 1054 GACACCATTGAGAACGTCAAAGCAAAAATCCAGGACAAAGAAGGTATCCCACCAGACCAA 995 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | | || || || | ||||||| | | | | || ||||| ||| Sbjct 994 CAGCGTCTCATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACACTGAGTGACTACAAC 935 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||||||| | || |||| || Sbjct 934 ATCCAGAAAGAATCTACTCTTCACTTGGTACT 903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 26830 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAAC 26889 ||||||| ||| | |||||| ||| || ||||| ||||| || ||||| ||||| | Sbjct 256 ACACCATTGAGAACGTCAAAGCAAAAATCCAAGACAAGGAAGGTATCCCTCCAGATCAGC 197 Query 26890 AAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACA 26949 | | ||||| | | ||||||||| || ||||||| | | | | || ||||| |||| Sbjct 196 AGCGTCTCATCTTTGCCGGCAAACAGCTGGAAGATGGTCGTACACTGAGTGACTACAACA 137 Query 26950 TTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | || |||||||||||| | || |||| || Sbjct 136 TCCAGAAAGAATCTACTCTTCACTTGGTACT 106 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| ||| | |||||| | || | ||| || Sbjct 886 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAACCATCA 827 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | |||||| || || ||||| ||||| || ||||| ||||| Sbjct 826 GACACTATTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 767 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | | || || || | ||||||| | | | || ||||| ||| Sbjct 766 CAGCGTCTCATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGTACACTGAGTGACTACAAC 707 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||||||| | || |||| || | ||| |||| || Sbjct 706 ATCCAGAAAGAATCTACTCTTCACTTGGTACTCCGTCTTCGAGGTGG 660 >seq30926 Length=14648 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 71713 CAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTG 71772 |||||| || ||||| || |||| || | |||||||||||||| ||||| || || || Sbjct 540 CAATGAAGGCAAAATGCATGGATTTCTGAGGATGTACTGGGCCAAGAAGATACTGGAATG 481 Query 71773 GACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCT 71832 ||| || | || |||||||| || || | | | || ||||| || |||| ||| || Sbjct 480 GACAGAATCACCGGAGCAGGCTCTGGAATTTGCCATCTATCTCAATGATAAATATGAACT 421 Query 71833 CGACGGTCGCGATCCTAACGGTTATGTCGGTT 71864 || ||| | ||||| || || ||||| |||| Sbjct 420 GGATGGTAGAGATCCCAATGGCTATGTTGGTT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477356519223600