Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq190700 95.1 3e-14 >seq190700 Length=4627 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 9/193 (5%) Strand=Plus/Minus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAAC------AATGAACGTTCATTCGCG 22488 ||||| |||||||| ||||| || | ||||| ||| |||| | ||| || | Sbjct 1830 AAGAAGAAGGCAGACTGGGCACTCAGTTGGATAAACTCTGACAATGCATGTT-AT--GGT 1774 Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 ||||| | | |||||||||| ||||| || || |||||||||||| ||||| || Sbjct 1773 GAACGCATCGTGGCATTTGCTGCAGTTGAGGGAATCTTCTTTTCTGGATCATTTGCATCA 1714 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 ||||| ||| | || ||||||| | ||||| || | || || || ||||| | || Sbjct 1713 ATCTTCTGGTTGAAGAAACGTGGTCTCATGCCTGGCTTGACTTTCTCCAATGAACTTATC 1654 Query 22609 AGCCGAGATGAGG 22621 ||| ||||||||| Sbjct 1653 AGCAGAGATGAGG 1641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1299708912175410