Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq56461 140 2e-28 seq42664 140 2e-28 seq77248 105 4e-18 seq168075 102 5e-17 seq168074 102 5e-17 seq66242 102 5e-17 seq67374 98.7 7e-16 seq79916 96.9 2e-15 seq24345 96.9 2e-15 seq27093 84.2 1e-11 seq83349 82.4 5e-11 >seq56461 Length=840 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 511 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 570 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 571 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 605 >seq42664 Length=8445 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1355 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1414 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1415 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1449 >seq77248 Length=110 Score = 105 bits (116), Expect = 4e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 8 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCTTCTATCGGTCTCGT 67 Query 20007 GGTAATATTTAGCCTT 20022 | | ||||||||||| Sbjct 68 GCCAGTATTTAGCCTT 83 >seq168075 Length=123 Score = 102 bits (112), Expect = 5e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 32 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCGCGGTACTTGTCTTCTATCGGTCTCGT 91 Query 20007 GGTAATATTTAGCCTT 20022 | | ||||||||||| Sbjct 92 GCCAGTATTTAGCCTT 107 >seq168074 Length=123 Score = 102 bits (112), Expect = 5e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 32 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCCCGGTACTTGTCTTCTATCGGTCTCGT 91 Query 20007 GGTAATATTTAGCCTT 20022 | | ||||||||||| Sbjct 92 GCCAGTATTTAGCCTT 107 >seq66242 Length=1664 Score = 102 bits (112), Expect = 5e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1095 CTCTCTCTTTAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCTCCTATCGGTCTCGT 1154 Query 20007 GGTAATATTTAGCCTT 20022 | | ||||||||||| Sbjct 1155 GCCAGTATTTAGCCTT 1170 >seq67374 Length=1687 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| |||||||| ||| || || || ||||| ||| Sbjct 1114 TACCACCACGGAGACGGAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCAC 1173 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || ||| | || || || || || || ||||| || || || ||||| || | | Sbjct 1174 TCAGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTG 1233 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||||||| |||||| ||| ||||||| | || ||| ||||| Sbjct 1234 GGATACCTTCTTTGTCCTGGATTTTTGCCTTAACATTCTCAATGGTGTCTGATGGTTCAA 1293 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | |||||| ||||| |||||||| Sbjct 1294 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 1342 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| |||||||| || || || || ||||| ||| Sbjct 886 TACCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCAC 945 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || ||| | || || || || || || ||||| || || || ||||| || | | Sbjct 946 TCAGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTG 1005 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||||||| |||||| || || |||| | || ||| ||||| Sbjct 1006 GGATACCTTCTTTGTCCTGGATTTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAA 1065 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || ||||| || || | |||||| || || |||||||| Sbjct 1066 CCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1114 >seq79916 Length=1201 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | Sbjct 544 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCTTCTATTGGTCTTGT 603 Query 20007 GGTAATATTTAGCCTT 20022 | | ||||||||||| Sbjct 604 GCCAGTATTTAGCCTT 619 >seq24345 Length=108 Score = 96.9 bits (106), Expect = 2e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGT 20009 ||||||||||||||||||||||||||||||||||||||||| ||||||||| || | Sbjct 1 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCTTCTATCGGTCGCGTGCC 60 Query 20010 AATATTTAGCCTT 20022 | ||||||||||| Sbjct 61 AGTATTTAGCCTT 73 >seq27093 Length=109 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 56 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCTTCTATCGG 109 >seq83349 Length=109 Score = 82.4 bits (90), Expect = 5e-11 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCG 19999 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 57 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTCTTCTATCG 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334056246204905