Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq67374 158 1e-33 >seq67374 Length=1687 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||||||||| || |||||||| || Sbjct 429 ATACCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCA 488 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| |||||| || || |||||||| ||||||||||||||||||| ||| Sbjct 489 CTCAGTGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGA 548 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| || || ||| | | |||| |||||| | | |||| Sbjct 549 GGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCG 608 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | |||||||| || || ||||| ||||| |||||||| Sbjct 609 ACCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 658 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||||||||| || |||||||| || Sbjct 885 ATACCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCA 944 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| |||||| | || |||||||| ||||||||||||||||||| || Sbjct 945 CTCAGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGT 1004 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| || ||| ||| | | |||| |||||| | | ||| Sbjct 1005 GGGATACCTTCTTTGTCCTGGATTTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCA 1064 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | |||||||| || || ||||| ||||| |||||||| Sbjct 1065 ACCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1114 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||| ||||| || |||||||| || Sbjct 1113 ATACCACCACGGAGACGGAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCA 1172 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| |||||| | || |||||||| ||||||||||||||||||| || Sbjct 1173 CTCAGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGT 1232 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||||||||| || ||||| ||| | | |||| |||||| | | ||| Sbjct 1233 GGGATACCTTCTTTGTCCTGGAT-TTTTGCCTTAACATTCTCAATGGTGTCTGATGGTTC 1291 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| || || |||||||| Sbjct 1292 AACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 1342 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | ||||||||||| || ||||| || || Sbjct 1341 ATACCACCACGCAGACGGAGAACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCA 1400 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| |||||| ||| || || || || ||||| |||| | | ||| || || ||| Sbjct 1401 CTCAGTGTACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGA 1460 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| || ||| ||| | | ||||| |||||| | | |||| Sbjct 1461 GGGATACCTTCTTTGTCCTGGATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCG 1520 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| ||||| |||||||| Sbjct 1521 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1570 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||||||||||| || |||||||| || Sbjct 657 ATACCACCTCGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCA 716 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| |||||| | || |||||||| ||||||||||||| || || ||| Sbjct 717 CTCAGTGTACGGCCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGA 776 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| || || ||| | | |||| ||||| | | ||| Sbjct 777 GGGATACCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATAGTGTCTGATGGTTCA 836 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | |||||||| || || ||||| ||||| |||||||| Sbjct 837 ACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 886 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||||||||| || |||||||| || |||| |||||| |||||| || ||||| || Sbjct 121 GTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAGCTGTTTGCCG 180 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 || ||||||||||||| || || ||||| || ||||| ||||| Sbjct 181 GCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTC 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419016849717060