Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2045 89.7 5e-13 seq1679 89.7 5e-13 >seq2045 Length=971168 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| ||||||| ||||| || |||||||| || |||||||| |||| Sbjct 725435 ACCACCACGAAGTCTGAGCACTAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGA 725494 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||||||||| || |||||| |||| | || |||||| || || || Sbjct 725495 TAGAGTACGTCCATCTTCAAGCTGTTTTCCGGCAAAAATCAACCTCTGCTGATCTGGGGG 725554 Query 64336 AATTCCT 64342 || ||| Sbjct 725555 GATACCT 725561 >seq1679 Length=151814 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 154610 TTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCC 154669 ||| |||| ||| ||||||| ||||||||| | || | || ||||| || || || Sbjct 45911 TTCCTCAGCACTGCTGTATTCCACAATTTCGGTACAGAGGTTGCTGCACTTGATAGTTCC 45852 Query 154670 CAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCC 154729 |||||| | ||| || ||||| ||||||| || || ||||| | || ||||| ||||| Sbjct 45851 CAGGTTCTGCTGGTTTGATTTCCTGTTGCAGGCATCCTTGTAAAGCATATACGGAGTGCC 45792 Query 154730 CGTTTCCACTTGGGTTTCAATAAT 154753 |||||| || | |||||| || Sbjct 45791 CGTTTCAGTCTGAGCTTCAATGAT 45768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498281675302200