Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq67374 116 4e-21 >seq67374 Length=1687 Score = 116 bits (128), Expect = 4e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || ||||||||||| |||| ||||| || || | || ||||| | | Sbjct 921 GATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAACTGCTTACCAGCA 980 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||||||||| || || |||||||||||||| ||||||| ||| | Sbjct 981 AAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTTTGCTTTGACG 1040 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || ||||| | || | ||||| ||||| || ||||| Sbjct 1041 TTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTG 1100 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 1101 ACAAAGATCTGCAT 1114 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || ||||||||||| |||| ||||| || || || || ||||| | | Sbjct 465 GATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAGCTGCTTACCAGCA 524 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||||||||| ||||| || ||||| ||||| |||||| ||| | Sbjct 525 AAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACG 584 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || ||||| | || | ||||| ||||| || ||||| Sbjct 585 TTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTG 644 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 645 ACAAAGATCTGCAT 658 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| |||| ||||| || || | || ||||| | | Sbjct 1149 GACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAACTGCTTACCAGCA 1208 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||||||||| || || |||||||||||||| ||||||| || | Sbjct 1209 AAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTTTGCCTTAACA 1268 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | || ||||| | || | || || ||||| || ||||| Sbjct 1269 TTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTG 1328 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1329 ACGAAGATCTGCAT 1342 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| || || | | || || || || ||||| ||||| ||| Sbjct 1344 CCACCACGCAGACGGAGAACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTC 1403 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || || | | |||| | | ||| || || ||||| Sbjct 1404 AGTGTACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGG 1463 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| ||||||| ||| | | ||| | |||||| | | || ||| Sbjct 1464 ATACCTTCTTTGTCCTGGATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACC 1523 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || ||||| ||||| |||||||| Sbjct 1524 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1570 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || || || | | || || || || ||||||||||| ||| Sbjct 660 CCACCTCGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTC 719 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | || ||||| | | |||| |||||||| || || ||||| Sbjct 720 AGTGTACGGCCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGG 779 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| |||||| ||| | | || | ||||| | | || ||| Sbjct 780 ATACCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATAGTGTCTGATGGTTCAACC 839 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || ||||| ||||| |||||||| Sbjct 840 TCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 886 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| | || || || | | || || || || ||||||||||| || Sbjct 90 GCCACCACGCAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACT 149 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || || ||||| |||| | |||| |||||||| || || ||||| Sbjct 150 CAGTGTACGACCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 209 Query 138507 TATACCTTCTTTGTCGGTGATTTTT 138531 |||||||| ||||| ||||||| Sbjct 210 GATACCTTCCTTGTCTTGGATTTTT 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494908503123600