Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq67374 96.9 2e-15 >seq67374 Length=1687 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || ||||| ||||| ||||| || |||||||| || || Sbjct 660 CCACCTCGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTC 719 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| || || || ||||| | || | |||||| || || || Sbjct 720 AGTGTACGGCCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGG 779 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||| ||| ||| | || ||||| || ||| || Sbjct 780 ATACCTTCCTTGTCCTGGATTTTAGCTTTGACATTCTCAATAGTGTCTGATGGTTCAACC 839 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| |||||||| || || || ||||| ||||| || |||||| Sbjct 840 TCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCATA 887 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| ||||| || |||||||| || || || | | | ||||| Sbjct 450 ACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 509 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || ||||| | || | |||||||||||| || || ||||||||||| Sbjct 510 AGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGG 569 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 |||||| ||| || | || || || || ||| || || | || |||||||| Sbjct 570 ATTTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTG 629 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| ||||| || |||||| Sbjct 630 CCAGTGAGGGTTTTGACAAAGATCTGCATA 659 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| ||||| || |||||||| || || || | | | ||||| Sbjct 906 ACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 965 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || || || ||||| | || | |||||||||||| ||| || ||||| ||||| Sbjct 966 AACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGG 1025 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||| || | || || || || ||| || || | || |||||||| Sbjct 1026 ATTTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTTG 1085 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| ||||| || |||||| Sbjct 1086 CCAGTGAGGGTTTTGACAAAGATCTGCATA 1115 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| ||||| || |||||||| || || || | | | ||||| Sbjct 1134 ACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 1193 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || || || ||||| | || | |||||||||||| ||| || ||||| ||||| Sbjct 1194 AACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGG 1253 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || ||| | || || || || ||| || || | ||| ||||| || Sbjct 1254 ATTTTTGCCTTAACATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTTG 1313 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || |||||| Sbjct 1314 CCAGTGAGGGTTTTGACGAAGATCTGCATA 1343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356441343422675