Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq67374 123 2e-23 seq190700 109 5e-19 >seq67374 Length=1687 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| |||||||||||||| | || ||||| | | Sbjct 658 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTGGAGGTCGAACCATCA 599 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| ||||||| ||||| || || || || | ||||| Sbjct 598 GACACCATTGAGAACG-TCAAAGCCAAAATCCAGGACAAGGAAGGCATCCCTCCAGACCA 540 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || || || |||||||| || | || || || | |||||||| Sbjct 539 ACAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACACTGAGTGACTACAA 480 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || ||| | || || || ||||| || ||| Sbjct 479 CATCCAGAAAGAATCTACTCTTCACTTGGTACTCCGT 443 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| |||||||||||||| | || || || | | Sbjct 1114 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTGGAGGTTGAACCATCA 1055 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| |||||||| |||||||| || || || | ||||| Sbjct 1054 GACACCATTGAGAACG-TCAAAGCAAAAATCCAGGACAAAGAAGGTATCCCACCAGACCA 996 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || || || ||| |||| || | || || || | |||||||| Sbjct 995 ACAGCGTCTCATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACACTGAGTGACTACAA 936 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || ||| | || || || ||||| || ||| Sbjct 935 CATCCAGAAAGAATCTACTCTTCACTTGGTACTCCGT 899 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| ||||||||| | || || || | | Sbjct 1342 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAACCATCA 1283 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | |||||||| |||||||| || || || | |||||| Sbjct 1282 GACACCATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGTATCCCACCAGACCAA 1223 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || || || ||| |||| || | || || || | ||||||||| Sbjct 1222 CAGCGTCTCATCTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACACTGAGTGACTACAAC 1163 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || || || ||||| || ||| Sbjct 1162 ATCCAGAAAGAGTCTACTCTTCACTTGGTACTCCGT 1127 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| ||||||||||||||| | || || || | | Sbjct 886 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACCCTTGAGGTTGAACCATCA 827 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| ||||||| ||||| || || || || | || || Sbjct 826 GACACTATTGAGAATGTCAAAGCTAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 767 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | || || || ||| |||| || | || || || | ||||||||| Sbjct 766 CAGCGTCTCATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGTACACTGAGTGACTACAAC 707 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| | || || || ||||| || ||| | |||| || Sbjct 706 ATCCAGAAAGAATCTACTCTTCACTTGGTACTCCGTCTTCGAGGTGG 660 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| |||||||| ||||| || || || || | || || ||||| ||||| | || Sbjct 239 AAAGCAAAAATCCAAGACAAGGAAGGTATCCCTCCAGATCAGCAGCGTCTCATCTTTGCC 180 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 |||||||||||||| || | || || || | |||||||||||||| || ||| | || Sbjct 179 GGCAAACAGCTGGAAGATGGTCGTACACTGAGTGACTACAACATCCAGAAAGAATCTACT 120 Query 38442 CTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 || || ||||| || ||| || | || |||| Sbjct 119 CTTCACTTGGTACTCCGTCTGCGTGGTGGCC 89 >seq190700 Length=4627 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 |||| ||||| ||||| ||||| || || || || ||||| |||| || || || Sbjct 2666 ACCAAGTTTTCATTGACAATGCCATCACTTGCAGCAAAAAAAGCCAATACATGTGAAATA 2725 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 ||||| | || | || |||| || ||||| | | | |||||| |||| || || Sbjct 2726 AAATGCCTTTCATCATCTTTCAGGCCTTCCCAATGGATCAAGTCCTTTGACAAATCTACT 2785 Query 133399 TCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATAT 133458 ||||| | |||||||| ||||| || |||||||||||||| ||| || || |||| Sbjct 2786 TCCTCAGCCGTCCAAAATGACGCTTCCGCTTTTTTGTACATCTGCCAGATATCATGATAT 2845 Query 133459 TGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 | || ||||| || ||||| || | |||||||| Sbjct 2846 TCAATTGGAAATATGACAAAACGCCTTGGGTTTTC 2880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498808234819200