Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1679 89.7 6e-13 >seq1679 Length=151814 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 |||||| || | || |||||| ||||| || | ||||| ||||||| | ||| Sbjct 50247 AAACTCCCCTGATAGTACTCTTCTGGAGTAGATATTGCTGGTGTAAGGTTCAATGGCTTC 50188 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 || || |||| ||| ||||| ||||| || || ||||| |||||||||| || ||||| Sbjct 50187 GTTGTTCCCCAGGATCTGTGCCGTGGATGCCGTCGGCATCGGTGCCATCAGCAGGCTGTT 50128 Query 106027 ACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGT--AGTTGAGCTTG 106084 || | || | | || || ||||||| |||||||||||| || | || | | Sbjct 50127 CCGTACTCCATGCTGGGCAATCTCTTTCTTGAGAGCATCCCAGTCGTGGAGATCAG-TGG 50069 Query 106085 GTTTCACCTTCCCACATATC 106104 || |||| || ||||||||| Sbjct 50068 GTGTCACATT-CCACATATC 50050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588371221756200