Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq31712 91.5 2e-13 >seq31712 Length=423171 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGT 154931 || ||| | || |||||||| || |||||| |||||| || | || || | || Sbjct 323696 ATCATGTTGACCTACCCATCAACCAGTGGTGTCTTTGAAGAAGACGTCAGGGAGTTGTGC 323755 Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 | || | || || || ||||| || ||||| ||||| || || | |||||||| Sbjct 323756 GACATGATCCACGATGCCGGAGGTCAAGTCTATCTGGATGGTGCCAACATGAATGCACAA 323815 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || || || ||| | || ||||| || || || | |||| | || ||||| || Sbjct 323816 GTTGGTCTGTGCCGACCCGGCGATTATGGAGCCGACGTCTCTCATTTGAATTTACACAAG 323875 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || ||||||||||| ||||| |||||||| || || | ||||| || || || Sbjct 323876 ACGTTCTGTATTCCTCATGGTGGTGGAGGACCAGGAATGGGTCCAATTGGCGT 323928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577632598879200