Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq67374 156 9e-33 >seq67374 Length=1687 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| |||||||| || || ||||| || || || | |||||||| | ||| Sbjct 1139 GTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAACTG 1198 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| || || ||||||||||| || || ||||||||||| || ||||| Sbjct 1199 CTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTT 1258 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| || |||||||||||||| || ||| || |||||||| | ||||| || || Sbjct 1259 TGCCTTAACATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTTGCCAGT 1318 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | ||||| Sbjct 1319 GAGGGTTTTGACGAAGATCTGCAT 1342 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || ||||| || || ||||| || || || | |||||||| ||||| Sbjct 455 GTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAGCTG 514 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| || || |||||||||||||| |||||||| ||||| || ||||| Sbjct 515 CTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTT 574 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||||||||||| || ||| || || || || | || || || || Sbjct 575 GGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTGCCAGT 634 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| Sbjct 635 GAGGGTTTTGACAAAGATCTGCAT 658 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || ||||| || || ||||| || || || | |||||||| | ||| Sbjct 911 GTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAACTG 970 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| || || ||||||||||| || || ||||||||||| || ||||| Sbjct 971 CTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTT 1030 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||||||||||||||||| || ||| || || || || | || || || || Sbjct 1031 TGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTTGCCAGT 1090 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| Sbjct 1091 GAGGGTTTTGACAAAGATCTGCAT 1114 Score = 129 bits (142), Expect = 1e-24 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||| || ||||| || || || || || || || | ||||| || Sbjct 1361 AACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTCAGTGTACGACCATCCTC 1420 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || ||||| | || || || |||||||| || ||||||||||| || Sbjct 1421 CAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCCTG 1480 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||||| || ||||||||||| || ||| || |||||||| | ||||| Sbjct 1481 GATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACCTCAAGGGTGATGGTCTT 1540 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | ||||| || || | |||||| Sbjct 1541 GCCAGTGAGGGTTTTGACAAAGATCTGCATT 1571 Score = 118 bits (130), Expect = 2e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || ||||| || || ||||| || || || | |||||||| ||||| Sbjct 114 GTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAGCTG 173 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| || || || || |||||||| || ||||| |||||||| ||||| Sbjct 174 TTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGGATTTT 233 Query 195057 TTGCTTGACGTTCTCAATGGTGT 195079 | ||||||||||||||||||| Sbjct 234 TGCTTTGACGTTCTCAATGGTGT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106379054321585